[wgs-assembler-users] multiple file input for pacBioToCA query

[nic b. <nb...@ma...>]

Hi there-

I looked through the archives and din't see a post regarding this item, which makes me think i am being obtuse here.

I wish to use pacBioToCa to correct a PacBio data set I have.
For error correction i can see that i can input  an illumina dataset and off I go. 
I have quite alot of gDNA data for this organism and would like to use it all thinking that more is beter.
 From looking over the documentation i believe that I can submit only one correction file is this correct?
Or is there a way for me to include 4 read sets with different pared/mate distances to correct my PacBio data?
For example i have a 4 illumina runs with 300 bp, 500 bp, 4kb, and 7 kb inserts respectively.

Thanks for any advice.




nic


Nicolas Achille Blouin, Ph.D.
Dept. of Biological Sciences
University of Rhode Island
120 Flagg Road, CBLS 260
Kingston, RI 02881