[wgs-assembler-users] Long time for PacBiocorrection

[Francois S. <fra...@ir...>]

Hi folks

I am running the PacBioToCa on my entire set of data (coverage 12x
PacBio, 55x Illumina, genome size ~ 400-450 Mb).

I have few weird errors of missed linked, and i re-launch regularly the
script to ensure its completion.

My question s how can you calculate the numbers of steps in the
runCorrection.sh part ? It is already on the 19th one, and it ran for
days....

Can someone help me ?

Francois

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Francois Sabot, PhD

Be realistic. Demand the Impossible.
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