[wgs-assembler-users] DNC as a stand-alone preprosessor

[Hajime O. <hoh...@ni...>]

Hi, 

I found the CA7's "De Novo Classificaton" is quite useful for preprosessing of illumina Mate-Pair reads. 
Hopefully I can use it as a stand-alone preprosessing program. 

Here I have two illumina libraries (a MP and a PE), and I added these lines in my spec file and ran the runCA. 
  stopAfter = classifyMates
  dncMPlibraries = MP2400
  dncBBlibraries = PE300

The runCA has successfully finished, then I'd like to refer the DNC result to divide my MP-reads into three categories. 
But I could not find any simple text files for that. I'm afraid the information is in binary files... 

May I have any workaround to my goal?  Or isn't it available as a stand-alone one?


Many thanks in advance, 

--Hajime