[wgs-assembler-users] failed to unitig

[Audrey N. <aud...@ho...>]

utgErrorRate = 0.03
utgErrorLimit = 2.5 
ovlErrorRate=0.06  
cnsErrorRate=0.06 
cgwErrorRate=0.10 
#
frgMinLen = 64 
ovlMinLen = 40 
#
overlapper = ovl
obtOverlapper = ovl  
ovlOverlapper = ovl  
#
ovlStoreMemory = 100000 
saveOverlaps = 1 
#
merSize = 22    
#
ovlThreads = 4 
ovlConcurrency = 5 
#
ovlHashBits = 21 
ovlHashBlockLength = 30000000 
ovlRefBlockSize = 200000000 
#
merylMemory = 200000 
merylThreads =  4 
#
frgCorrBatchSize = 200000 
frgCorrThreads = 4 
frgCorrConcurrency = 5 
#
unitigger = bog 
#
computeInsertSize = 0 
#
cnsConcurrency = 2  
#
closureOverlaps = 0 
closurePlacement = 2 
createACE = 0 
#
#454 Shotguns
/project/Budworm_shotgun2.frg
#
#Paired-ends
/project/Budworm_Pairend.frg
/project/S7_subsetPE.frg
/project/ill700_subsetPE.frg
#