/usr/hpc-bio/celera-8.3-svn/Linux-amd64/bin/meryl -B -C -m 31 -threads 4 -memory 737280 -s /biowrk/celera/juglans.regian/PRJNA291087.DNA/juglans.gkpStore:untrim -o /biowrk/celera/juglans.regian/PRJNA291087.DNA/9-terminator/mercy/juglans-ms31-frgFull
seqFactory::registerFile()-- Cannot determine type of file '/biowrk/celera/juglans.regian/PRJNA291087.DNA/juglans.gkpStore:untrim'. Tried:
seqFactory::registerFile()-- 'FastA'
seqFactory::registerFile()-- 'FastAstream'
seqFactory::registerFile()-- 'Fastq'
seqFactory::registerFile()-- 'FastQstream'
seqFactory::registerFile()-- 'seqStore'
seqFactory::registerFile()-- 'gkpStore'
seqFactory::registerFile()-- 'gkpStoreChain'
this error will not stop the runCA command .
should we remove this command or fix it?
I searched the source, there is only one place about "gkpStore:untrim",