Recent changes to Tools

WikiPage Tools modified by Tim Schaefer

Tim Schaefer — Tue, 17 Apr 2012 12:39:44 -0000

--- v5 
+++ v6 
@@ -1,5 +1,5 @@
 Small tools included in the VPLG release:
-=========================================
+
 
 rpg -- Random protein graph generator
 ======================================

WikiPage Tools modified by Tim Schaefer

Tim Schaefer — Tue, 17 Apr 2012 12:39:30 -0000

--- v4 
+++ v5 
@@ -1,6 +1,8 @@
 Small tools included in the VPLG release:
+=========================================
 
 rpg -- Random protein graph generator
+======================================
 
 This is a Perl script which can be used to generate random protein graphs in the VPLG graph file format. These graphs can then be drawn with the [PLCC] software. You can use the following command to access the built-in help:

WikiPage Tools modified by Tim Schaefer

Tim Schaefer — Thu, 23 Feb 2012 17:49:02 -0000

--- v3 
+++ v4 
@@ -23,5 +23,6 @@
 [RPG]   EXAMPLE : rpg.pl -v 100 -p 0.1 -o random_graph_100_01.plg
 ~~~~~~
 
+


 
 We suggest you read the documentation provided with the release or use the built-in help of your version for up-to-date information.

WikiPage Tools modified by spirit

spirit — Tue, 24 Jan 2012 16:45:39 -0000

--- v2 
+++ v3 
@@ -23,3 +23,5 @@
 [RPG]   EXAMPLE : rpg.pl -v 100 -p 0.1 -o random_graph_100_01.plg
 ~~~~~~
 
+
+We suggest you read the documentation provided with the release or use the built-in help of your version for up-to-date information.

WikiPage Tools modified by spirit

spirit — Tue, 24 Jan 2012 16:44:36 -0000

--- v1 
+++ v2 
@@ -1,3 +1,25 @@
 Small tools included in the VPLG release:
 
-* rpg -- Random protein graph generator. This is a Perl script which can be used to generate random protein graphs in the VPLG graph file format. These graphs can then be drawn with the [PLCC] software.
+rpg -- Random protein graph generator
+
+This is a Perl script which can be used to generate random protein graphs in the VPLG graph file format. These graphs can then be drawn with the [PLCC] software. You can use the following command to access the built-in help:
+
+~~~~~~
+./rpg.pl -h
+~~~~~~
+
+Depending on the version, you will see something like this:
+
+
+~~~~~~
+[RPG] rpg.pl -- Random Protein Graph -- generate random protein graphs in the plg format of plcc
+[RPG] This program is part of plcc, written by Tim Schaefer.
+[RPG]   USAGE   : rpg.pl [options]
+[RPG]    Valid options are:
+[RPG]     -h                    : Print this help message and exit.
+[RPG]     -v      : Number of vertices the graph should have (positive integer). Default=100.
+[RPG]     -p  : Probability that an edge is created between a pair of vertices (positive float between 0 and 1). Default=0.1.
+[RPG]     -o           : Path where to write the output file. Default='random_graph.dpg'.
+[RPG]   EXAMPLE : rpg.pl -v 100 -p 0.1 -o random_graph_100_01.plg
+~~~~~~
+

WikiPage Tools modified by spirit

spirit — Tue, 24 Jan 2012 16:41:34 -0000

Small tools included in the VPLG release: * rpg -- Random protein graph generator. This is a Perl script which can be used to generate random protein graphs in the VPLG graph file format. These graphs can then be drawn with the [PLCC] software.