Re: [vmtk-users] Automatically executing VMTK centerline

[Luca A. <luc...@or...>]

Hi Anouk,
 try with 
-seedselector profileidlist -sourceids 0 -targetids 1

(hoping you have a recent enough version of vmtk)

Best,


Luca


On Mar 25, 2013, at 7:36 PM, Anouk Post wrote:

> Dear VMTK users,
> 
> I am using VMTK centerline to calculate the centerline of an stl file as follows:
> 
> vmtksurfacereader -ifile /Users/.../Phantom_Best_Catheter_now.stl -f "stl"  --pipe vmtkcenterlines -endpoints 1 -seedselector openprofiles --pipe  vmtkcenterlinegeometry -ofile /Users/.../Phantom_Best_Catheter_now_output.dat
> 
> 
> 
> For all the different input files I use, the seedselector option always leads to me pressing 'q' '0' '1' and then it works. So I close the viewer, and I think I set the source id as 0 and the target id as 1. 
> 
> Is there a way to make this an automatic process so I don't have to type q, 0, 1 each time? I've tried using seedselector idlist but I'm not sure how to use it (it does not give me the right answer when I use -sourceids 0 -targetids 1. 
> 
> Does anyone know a way to do this?
> 
> 
> Thanks in advance!
> 
> 
> Best wishes,
> 
> 
> Anouk
> 
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