VCFannotator

Annotate SNPs in the context of Gene Annotations

Brought to you by: bhaas

Add a Review

Downloads: 0 This Week

Last Update: 2013-10-13

Download

Get an email when there's a new version of VCFannotator

A VCF file is parsed to identify genomic variations, and these variations are placed in the context of genome feature annotations. In the case that a mutation is coding, the type of coding mutation and impact on the protein-coding sequence is indicated.

Project Activity

See All Activity >

Follow VCFannotator

VCFannotator Web Site

Other Useful Business Software

Build Agents and Models on One Platform

Everything you need to build production-ready agents and models. Access 200+ Google and third-party AI models and tools.

Gemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.

Start Free

Rate This Project

User Reviews

Be the first to post a review of VCFannotator!

Additional Project Details

Registered

2012-07-06

Report inappropriate content

Build Agents and Models on One Platform

Everything you need to build production-ready agents and models. Access 200+ Google and third-party AI models and tools.

Start Free

Recommended Projects

MutaNET
NGS Pipeline and Automated Mutation Analysis
PANTHER
PANTHER project: software for modeling of protein sequence and function evolution, and tools for applying these data to the analysis of genome data, expression data and coding SNPs. Details available at http://www.pantherdb.org.
Seurat
A sequence analysis tool for normal/tumor DNA and RNA data.
Peptide Vaccine Analysis Tool PVAT
Peptide Vaccine Analysis Tool (PVAT) is an optimization software that predicts the best possible peptide stretches in a given protein sequence based on two factors: 1. the surface exposure of the peptide stretches, and 2. their susceptibility to mutation.
ICRPfinder
ICRPfinder finds or generates DNA patterns which can include restriction enzyme recognition sites in coding sequences without changing the translated protein sequence.