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The VAN package enables an integrative analysis of (i) gene expression data with protein-protein interaction networks or (ii) gene and microRNA expression data with microRNA-gene interaction networks to identify biologically perturbed networks.

This package is licensed under the GNU Lesser General Public License version 3.0 (LGPLv3).

1. Manuals

To download the User Guide (which contains the installation instructions and example code) , click here

To download the manual describing the R functions, click here

2. Packages

The VAN package contains the code for integrative analysis and the VANData package provides the microRNA-gene mapping in an R-readable format. To download the two packages, click on the relevant links below

For Windows users
VAN
VANData

For Unix users
VAN
VANData

For Mac users
VAN
VANData

3. Example dataset

To execute the examples provided in the User Guide, download the "example dataset" by clicking here

4. Source code

To download the VAN package's source code, click here