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Source Code Commit Log
| Commit | Date | |
|---|---|---|
|
[r48]
by
biotelerock
Primary change is to catch a bug with MergeParedSamAlignments from xxx.bam files leading to a double return in the temp output that then crashes the Picard SortSam |
2013-01-16 20:14:59 | Tree |
|
[r47]
by
biotelerock
Lots of mods to support silent execution and only print errors so this can be run as a cron job. Modified all apps to only convert files that haven't been converted unless the -f force flag is given. |
2013-01-15 21:03:09 | Tree |
|
[r46]
by
biotelerock
Added option to delete uncompressed vcf files and force rewriting existing indexes |
2013-01-15 18:32:23 | Tree |
|
[r45]
by
biotelerock
Added new app that wraps the VCF tabix conversion for GNomEx auto conversions, updated the build.properties and applications.html |
2013-01-15 00:04:32 | Tree |
|
[r44]
by
tmosbruger
Fixed classpath error. Shouldn't have to extract 3rd part jar file anymore to complete document target. |
2013-01-13 18:59:01 | Tree |
|
[r43]
by
biotelerock
New app CalculatePerCycleErrorRate, mod to MergePairedSamAlignments to skip merging phiX, new methods to Num, updated releaseNotes and the build.properties. |
2013-01-11 17:01:29 | Tree |
|
[r42]
by
biotelerock
|
2013-01-07 15:53:08 | Tree |
| 2013-01-07 15:52:03 | Tree | |
|
[r40]
by
biotelerock
Fixed and issue where adjacent regions were pulling the same reads that then would both get written to file producing dups. |
2013-01-04 16:49:40 | Tree |
| 2013-01-02 20:32:02 | Tree |
