USeq Source Code

Brought to you by: biotelerock, bmilash, elainegee, scourdy, tmosbruger

Source Code Commit Log

Commit	Date
[r38] by biotelerock	2012-12-28 19:27:20	Tree
[r37] by biotelerock Modified instructions related to depreciating the MakeUSeq app.	2012-12-20 17:41:03	Tree
[r36] by biotelerock Deleted the tcr reference so this can be built by standard users.	2012-12-20 17:40:12	Tree
[r35] by biotelerock Mods and new apps for merging paired sam alignments	2012-12-20 17:14:44	Tree
[r34] by biotelerock	2012-12-18 20:59:41	Tree
[r33] by biotelerock New app for merging paired sam alignments. For use with exome and whole genome data. Use the SamTranscriptomeParser for RNASeq merging.	2012-12-18 20:53:46	Tree
[r32] by biotelerock Lots of modifications for making merged sam alignments from proper pairs. Many changes to the base recalling applications.	2012-12-15 14:11:23	Tree
[r31] by tmosbruger	2012-12-13 21:02:24	Tree
[r30] by tmosbruger	2012-12-13 15:41:02	Tree
[r29] by tmosbruger Updated ScoreMethylatedRegions to provide aggregate score. Created ScoreEnrichedRegions which does pretty much the same thing as ScoreMethylatedRegions but for ChIPseq or MBDseq data.	2012-12-12 21:37:55	Tree

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