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Updated ScoreMethylatedRegions to provide aggregate score. Created ScoreEnrichedRegions which does pretty much the same thing as ScoreMethylatedRegions but for ChIPseq or MBDseq data.

tmosbruger 2012-12-12

added /trunk/Source/edu/utah/seq/analysis/ScoreEnrichedRegions.java
changed /trunk/Source/edu/utah/seq/analysis/ScoreMethylatedRegions.java
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