USeq Source Code

Brought to you by: biotelerock, bmilash, elainegee, scourdy, tmosbruger

Commit [r188] Maximize Restore History

Lots of mods to support the processing of methylated datasets where particular chromosomes only have + or - stranded data and not both. This breaks most everything. Ugg.

Authored by: biotelerock 2013-12-06

Browse code at this revision

Parent: [r187]

Child: [r189]

changed	/trunk/Source/edu/utah/seq/analysis/BisStat.java
changed	/trunk/Source/edu/utah/seq/analysis/DefinedRegionDifferentialSeq.java
changed	/trunk/Source/edu/utah/seq/analysis/ScoreMethylatedRegions.java
changed	/trunk/Source/edu/utah/seq/data/PointData.java
changed	/trunk/Source/trans/roc/Positive.java

USeq Source Code

Commit [r188] Maximize Restore History

/trunk/Source/edu/utah/seq/analysis/BisStat.java Diff Switch to side-by-side view

/trunk/Source/edu/utah/seq/analysis/DefinedRegionDifferentialSeq.java Diff Switch to side-by-side view

/trunk/Source/edu/utah/seq/analysis/ScoreMethylatedRegions.java Diff Switch to side-by-side view

/trunk/Source/edu/utah/seq/data/PointData.java Diff Switch to side-by-side view

/trunk/Source/trans/roc/Positive.java Diff Switch to side-by-side view