USeq Source Code

Brought to you by: biotelerock, bmilash, elainegee, scourdy, tmosbruger

Source Code Commit Log

Commit	Date
[r153] by biotelerock ExportExons * Added name score and strand to the output DefinedRegionDifferentialSeq * Fixed a bug where genes with excessive counts were still being included in the DESeq analysis USeq2UCSCBig * Added a sandbox to the UCSC executables to limit memory and time on linux systems	2013-09-11 21:58:51	Tree
[r152] by biotelerock Fixed issue when running a no replica analysis that caused DESeq to error out.	2013-09-05 18:15:10	Tree
[r151] by biotelerock updated to USeq_8.6.6	2013-09-05 16:55:51	Tree
[r150] by biotelerock Merged docs with Tim's DRDS bug fix	2013-09-05 15:12:53	Tree
[r149] by biotelerock Modified output to a table instead of multi line	2013-09-05 15:06:19	Tree
[r148] by biotelerock Switched flag back to deleting temp files	2013-09-05 15:05:35	Tree
[r147] by tmosbruger DRDS fix added	2013-09-04 15:14:46	Tree
[r146] by tmosbruger Fixed an error where improperly paired reads and stacked pairs weren't counted towards the gene's read count.	2013-09-04 15:09:14	Tree
[r145] by biotelerock Misc mods, nothing significant	2013-08-30 22:22:29	Tree
[r144] by biotelerock Updated with poi classes	2013-08-30 22:21:38	Tree

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