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RNAEditingScanSeqs

* Added a minimum base fraction edited option to app to restrict what base observations are allowed into the analysis.
RNAEditingPileUpParser
* Fixed a bug where the parser was counting all of the reference reads (both plus and minus) when scoring a base for editing instead of just reads mapping to the matched strand when a stranded parsing was selected.

biotelerock 2013-06-24

changed /trunk/Source/edu/utah/seq/analysis/RNAEditingScanSeqs.java
changed /trunk/Source/edu/utah/seq/parsers/RNAEditingPileUpParser.java
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/trunk/Source/edu/utah/seq/parsers/RNAEditingPileUpParser.java Diff Switch to side-by-side view
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