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Source Code Commit Log


Commit Date  
[r123] by biotelerock

New apps imported from Picard and modified for extracting intenstiy info from CIF files

2013-06-20 15:11:24 Tree
[r122] by biotelerock

updated sam and picard jars

2013-06-20 15:09:52 Tree
[r121] by biotelerock

updated sam and picard jars

2013-06-20 15:09:31 Tree
[r120] by biotelerock

updated sam and picard jars

2013-06-20 15:09:12 Tree
[r119] by tmosbruger

Fixes and Improvements to the variation pipeline

2013-06-02 17:32:42 Tree
[r118] by biotelerock

Fixed a bug in STP related to merging paired RNASeq data and inappropriately assigning the strand.

2013-05-30 22:06:45 Tree
[r117] by biotelerock

Added option to NBP to parse bam files, updated the bisulfite tutorial/ user guide to recommend dropping dups with MarkDuplicates.jar

2013-05-30 19:27:02 Tree
[r116] by biotelerock

Mods to the MethylationArray apps, corrected a minor bug, added non paired functionality, updated the docs.

2013-05-29 17:13:23 Tree
[r115] by biotelerock

Fixed an issue that was causing a null pointer error due to lack of a genome build string.

2013-05-20 22:35:39 Tree
[r114] by biotelerock

Final modifications to the VCFComparator. This is ready to go.

2013-05-17 16:47:13 Tree
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