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//########################################################################## //# This software is part of the Treescaper i //# -- Version 0.1 //# Copyright (C) 2010 Wen Huang //# //# This program is free software; you can redistribute it and/or //# modify it under the terms of the GNU General Public License //# as published by the Free Software Foundation; either version 2 //# of the License, or (at your option) any later version. //# //# This program is distributed in the hope that it will be useful, //# but WITHOUT ANY WARRANTY; without even the implied warranty of //# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the //# GNU General Public License for more details. //# http://www.gnu.org/copyleft/gpl.html //########################################################################## This readme file describes how to compile the code on Windows, Linux(Ubontu) and MAC system. The rar includes the following files. log README Win32_TreeScaper.sln Win32_TreeScaper.vcproj Linux_TreeScaper.pro Mac_TreeScaper.pro nldrparas_default nldrparas plotparas_default plotparas treescaper.ui setting.ui Xtest.out test.out randgen.h setting.h treescaper.h ui_setting.h ui_treescaper.h warray.h wdef.h wDimEst.h wDimestthread.h wfile.h wImage.h wimport_form.h wmapping.h wmatrix.h wmix.h wNLDR.h wNLDRthread.h wPlotdimthread.h wPlotthread.h wstring.h main.cpp randgen.cpp setting.cpp treescaper.cpp warray.cpp wDimEst.cpp wDimestthread.cpp wfile.cpp wImage.cpp wimport_form.cpp wmapping.cpp wmatrix.cpp wmix.cpp wNLDR.cpp wNLDRthread.cpp wPlotdimthread.cpp wPlotthread.cpp wstring.cpp Compiling:(Windows, Linux, Mac) First, we need to change the file 'wdef.h'. If the platform is window, Linux, MAC respectively, then _WINDOWS, _LINUX and _MAC need to be defined in 'wdef.h'. Windows: 1, download qt 4.8.4 lib and also add-in for vc2008 from official webpage. 2, install qt. 3, go to http://www.netlib.org/clapack/ download CLAPACK-3.2.1-CMAKE.tgz 4, download cmake from : http://www.cmake.org/cmake/resources/software.html Open CMAKE Point to your CLAPACK-3.2.1-CMAKE folder in the source code folder Point to a new folder where you want the build to be (not the same is better) Click configure, check the install path if you want to have the libraries and includes in a particular location. Choose Visual Studio Solution. You can also choose nmake or any other platform. You may have to click again configure until everything becomes white Click generate, that will create the Visual Studio for CLAPACK and you are done. Close CMAKE Look in your "build" folder, you have your CLAPACK Visual Studio Solution, just open it. Build the "ALL_BUILD" project, it will build the solution and create the librarires 5, compile and build lib for vtkmpeg2encode use same method as we compile clapack 6, compile and build VTK open cmake-gui make 'bin' dir load source to be the dir of VTK and target to be dir of bin check advance and configure check VTK_USE_MPEG2_ENCODER and configure again 2 errors occur. add dirs for vtkmpeg2encode's include and lib. check configure again. The problem is solved. click generate go to 'bin' dir and open the .sln file then compile it 7, download vc2008 pro from the official webpage(90 days trial version) 8, download microsoft directx SDK. 8, Project->TreeScaper Properties. Configuration Properties->C/C++->General->Additional Include directories: "E:\TreeScaper\clapack-3.2.1-CMAKE\INCLUDE","E:\Qt4.8.4\include\QtWidgets","E:\Qt4.8.4\include\QtCore","E:\Qt4.8.4\include\QtGui","E:\Qt4.8.4\include","E:\Qt4.8.4\include\ActiveQt","debug",".","E:\Qt4.8.4\mkspecs\win32-msvc2008";"E:\TreeScaper\vtk\bin";"E:\TreeScaper\vtk\bin\Common";"E:\TreeScaper\vtk\bin\Utilities";"E:\TreeScaper\vtk\bin\VolumeRendering";"E:\TreeScaper\vtk\bin\Rendering";"E:\TreeScaper\vtk\bin\Charts";"E:\TreeScaper\vtk\bin\Utilities\vtkalglib";"E:\TreeScaper\vtk\vtk\Infovis";"E:\TreeScaper\vtk\vtk\Geovis";"E:\TreeScaper\vtk\vtk\Views";"E:\TreeScaper\vtk\vtk\VolumeRendering";"E:\TreeScaper\vtk\vtk\Hybrid";"E:\TreeScaper\vtk\vtk\Widgets";"E:\TreeScaper\vtk\vtk\Rendering";"E:\TreeScaper\vtk\vtk\Charts";"E:\TreeScaper\vtk\vtk\Rendering\Testing\Cxx";"E:\TreeScaper\vtk\vtk\IO";"E:\TreeScaper\vtk\vtk\Imaging";"E:\TreeScaper\vtk\vtk\Graphics";"E:\TreeScaper\vtk\vtk\GenericFiltering";"E:\TreeScaper\vtk\vtk\Filtering";"E:\TreeScaper\vtk\vtk\Common";"E:\TreeScaper\vtk\vtk\Utilities";"E:\TreeScaper\vtk\vtk\Common\Testing\Cxx";"E:\TreeScaper\vtk\bin\Utilities\vtklibproj4";"E:\TreeScaper\vtk\vtk\Utilities\vtklibproj4";"E:\TreeScaper\vtk\bin\Utilities\DICOMParser";"E:\TreeScaper\vtk\vtk\Utilities\DICOMParser";"E:\TreeScaper\vtk\bin\Utilities\vtkfreetype\include";"E:\TreeScaper\vtk\vtk\Utilities\vtkfreetype\include";"E:\TreeScaper\vtk\bin\Utilities\vtknetcdf";"E:\TreeScaper\vtk\vtk\Utilities\vtknetcdf";"E:\TreeScaper\vtk\bin\Utilities\vtkexodus2\include";"E:\TreeScaper\vtk\vtk\Utilities\vtkexodus2\include";"E:\TreeScaper\vtk\bin\Utilities\MaterialLibrary";"E:\TreeScaper\vtk\vtk\Utilities\MaterialLibrary";"E:\TreeScaper\vtk\bin\Utilities\verdict";"E:\TreeScaper\vtk\vtk\Utilities\verdict";"E:\TreeScaper\vtk\vtk\Utilities\utf8\source";"E:\TreeScaper\vtk\vtk\Utilities\vtkalglib";"E:\TreeScaper\vtk\vtk\Utilities\ftgl\src";"E:\TreeScaper\vtk\bin\Utilities\ftgl"; "E:\TreeScaper\vtk\vtkmpeg2encode"; 9, Project->TreeScaper Properties. Configuration Properties->Linker->Input->Additional Dependencies: E:\Qt4.8.4\lib\qtmaind.lib E:\Qt4.8.4\lib\QtGuid4.lib E:\Qt4.8.4\lib\QtCored4.lib kernel32.lib user32.lib gdi32.lib winspool.lib shell32.lib ole32.lib oleaut32.lib uuid.lib comdlg32.lib advapi32.lib "E:\TreeScaper\vtk\bin\bin\Debug\vtkWidgets.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkHybrid.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkRendering.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkGraphics.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkverdict.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkImaging.lib" "C:\Program Files\Microsoft DirectX SDK (June 2010)\Lib\x86\d3d9.lib" wbemuuid.lib "E:\TreeScaper\vtk\bin\bin\Debug\vtkIO.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkFiltering.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkCommon.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkDICOMParser.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkmetaio.lib" comctl32.lib wsock32.lib "E:\TreeScaper\vtk\bin\bin\Debug\vtksqlite.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkpng.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtktiff.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkzlib.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkjpeg.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkexpat.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtksys.lib" ws2_32.lib "E:\TreeScaper\vtk\bin\bin\Debug\vtkftgl.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkfreetype.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkexoIIc.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkNetCDF.lib" "E:\TreeScaper\vtk\vtkmpeg2encode\Debug\vtkMPEG2Encode.lib" vfw32.lib opengl32.lib "E:\TreeScaper\vtk\bin\bin\Debug\MapReduceMPI.lib" "E:\TreeScaper\vtk\bin\bin\Debug\mpistubs.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkalglib.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkCharts.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkGenericFiltering.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkGeovis.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkInfovis.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtklibxml2.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkproj4.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtksqlite.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkverdict.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkViews.lib" "E:\TreeScaper\vtk\bin\bin\Debug\vtkVolumeRendering.lib" "E:\TreeScaper\clapack\F2CLIBS\libf2c\Debug\libf2c.lib" "E:\TreeScaper\clapack\BLAS\SRC\Debug\blas.lib" "E:\TreeScaper\clapack\SRC\Debug\lapack.lib" 10, Project->TreeScaper Properties. Configuration Properties->Linker->Input->Ignore Specific Library: LIBCMTD.lib Linux: TreeScaper instructions for Ubuntu 12.04LTS 1, download qt 5.0.1 framework from official webpage. 2, change mode and run the qt-sourcefile by: chmod +x filename 3, install g++ by: sudo apt-get install g++ 4, update and install openGL sudo apt-get install freeglut3 sudo apt-get update sudo apt-get install freeglut3-dev 5, go to http://www.netlib.org/clapack/ download clapack.tgz (3.2.1) follow the readme to complie the souce code 6, go to http://www.vtk.org/VTK/resources/software.html download 5.10.1 source, data and also additional components unpack vtk, vtkdata and vtkmpeg2encode 7, install cmake-gui by sudo apt-get install cmake-qt-gui 8, compile and build lib for vtkmpeg2encode open cmake-gui load source and binary dirs as that of vtkmpeg2encode click configure and select use default native compliers click generate move to the dir of vtkmpeg2encode and use command: make 9, compile and build VTK open cmake-gui make 'bin' dir load source to be the dir of VTK and target to be dir of bin check advance and configure check VTK_USE_MPEG2_ENCODER and configure again 2 errors occur. add dirs for vtkmpeg2encode's include and lib. check configure again. The problem is solved. click generate go to 'bin' dir and use command 'make' to generate libs % 3, VTK % download vtk from http://www.vtk.org/VTK/resources/software.html#latest2. % download are vtk-5.8.0.tar.gz and vtkdata-5.8.0.tar.gz. % In addition, additional components(MPEG2) also need to be downloaded. % download cmake, cmake-2.8.6-Linux-i386.tar.gz, from: http://www.cmake.org/cmake/resources/software.html MAC: 0, make sure Xcode is installed in your computer. 1, QT Download QT SDK from qt ftp webpage: ftp://ftp.qt.nokia.com/qtsdk/ or official webpage: http://qt.nokia.com/downloads. Then install it. Because my mac mini is MAC OS 10.5.8, I download qt-sdk-mac-opensource-2010.05.dmg from ftp://ftp.qt.nokia.com/qtsdk/. 2, CLAPACK download clapack-3.2.1-CMAKE.tgz from http://www.netlib.org/clapack/ follow the readme to complie the souce code 3, VTK download cmake, cmake-2.8.5-Darwin-universal.dmg, from: http://www.cmake.org/cmake/resources/software.html download vtk from http://www.vtk.org/VTK/resources/software.html#latest2. Because my MAC mini is MAC OS X 10.5.8, I don't want to download latest version. The version I used is 5.6.1. What I download are vtk-5.6.1.tar.gz and vtkdata-5.6.1.tar.gz. In addition, additional components(MPEG2) also need to be downloaded. untar vtk-5.6.1.tar.gz, vtkdata-5.6.1.tar.gz and vtkmpeg2encode.tar.gz in a same directory. create a new fold 'bin' in the directory. open cmake, choose vtkmpeg2encode as source code and build directory. then click configure, choose Unix-makefiles as generator. Then click generate. Then go to this directory and use 'make' to build lib. open cmake, choose vtk-5.6.1 as source code and choose bin as build directory. then click configure. Then choose Unix-makefiles as generator. check the option VTE_USE_MPEG2_ENCODER. Check VTK_USE_CARBON and uncheck VTK_USE_COCOA. then click configure again. Some errors appear now. Then we could get rid of the errors by choosing directory of vtkmpeg2encode and lib that just generated. now, we can click generate. After that, go to the bin directory that just is generated, use 'make' to build libs of vtk. 4, Modify code open the file wdef.h, make sure _MAC is in the file. open the file Mac_TreeScaper.pro. then change the directory for each library and head file. 5, package use command "macdeployqt Treescaper.app/ -verbose=1 -dmg" to package. The macdeployqt is in the directory of QTSDK somewhere.
