Bugs item #2712234, was opened at 2009-03-25 13:47
Message generated for change (Comment added) made by mjdominus
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Category: ui
Group: piel
>Status: Closed
Priority: 8
Private: No
Submitted By: Mark Dominus (mjdominus)
Assigned to: Mark Dominus (mjdominus)
Summary: Taxon label editor displays wrong items
Initial Comment:
BP reports that during taxon validation,
> When I follow one of the "validate by hand" links, I see a list like this one for Actinomucor elegans: but it list three identical items to
> choose from, each having identical ncbi_taxids. We should never really see a list of multiple hits each with the same ncbi_taxid, but
> we can see multiple hits on the same ubio_namebankid.
(See http://8ball.sdsc.edu:6666/treebase-web/user/editTaxonLabel.html?taxonlabelid=237178 ; a copy of the HTML file is attached)
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>Comment By: Mark Dominus (mjdominus)
Date: 2009-05-08 09:45
Message:
Piel did not reply to my request for signoff two weeks ago, so I am closing
this.
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Comment By: Mark Dominus (mjdominus)
Date: 2009-04-22 15:09
Message:
I rebuilt the TI database; I believe it is complete and correct now.
I am awaiting confirmation from Bill to close this.
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Comment By: Rutger Vos (rvos)
Date: 2009-04-02 02:11
Message:
Unfortunately, the taxon label editor actually displays the *right* items.
Namely, there are three taxon variants with the same name, namebankID and
NCBI taxon ID in the database:
Actinomucor elegans, (Internal ID: 894, uBio: 2832730, NCBI: 64647)
Actinomucor elegans, (Internal ID: 546683, uBio: 2832730, NCBI: 64647)
Actinomucor elegans, (Internal ID: 554383, uBio: 2832730, NCBI: 64647)
It seems to me that the only way in which this issue can be resolved is by
re-validating the loaded taxon, taxonvariant and taxonlabel data and
collapsing such duplicates.
As per revision 6373, the duplicates are shown, e.g. see
http://8ball.sdsc.edu:6666/treebase-web/user/editTaxonLabel.html?taxonlabelid=237178
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Comment By: Mark Dominus (mjdominus)
Date: 2009-03-25 14:18
Message:
Also there is a lower-priority component to this bug; see #2712268
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