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From: Rutger V. <rut...@gm...> - 2010-06-09 13:17:46
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Hi, I have made some changes in how coordinates are attached to NeXML and how RDF is generated. Could these go to production? Rutger -- Dr. Rutger A. Vos School of Biological Sciences Philip Lyle Building, Level 4 University of Reading Reading RG6 6BX United Kingdom Tel: +44 (0) 118 378 7535 http://www.nexml.org http://rutgervos.blogspot.com |
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From: William P. <wil...@ya...> - 2010-06-11 19:27:26
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On Jun 9, 2010, at 9:17 AM, Rutger Vos wrote: > I have made some changes in how coordinates are attached to NeXML and > how RDF is generated. Could these go to production? Has a new build been triggered yet? It would be nice to see this on production. bp |
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From: Vladimir G. <vla...@du...> - 2010-06-14 15:22:11
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On Jun 11, 2010, at 3:27 PM, William Piel wrote: > > On Jun 9, 2010, at 9:17 AM, Rutger Vos wrote: > >> I have made some changes in how coordinates are attached to NeXML and >> how RDF is generated. Could these go to production? > > Has a new build been triggered yet? It would be nice to see this on > production. According to Jon, deployed to production this morning. --VG |
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From: William P. <wil...@ya...> - 2010-06-15 13:55:37
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On Jun 14, 2010, at 11:22 AM, Vladimir Gapeyev wrote: >> Has a new build been triggered yet? It would be nice to see this on >> production. > > According to Jon, deployed to production this morning. Thanks Vladimir. This is a bit odd because the lat/longs are not showing up in the NeXML of these matrices: http://purl.org/phylo/treebase/phylows/matrix/TB2:M5572?format=nexml http://purl.org/phylo/treebase/phylows/matrix/TB2:M5212?format=nexml ... yet they should be there. Can we confirm that, indeed, the dev and prod builds are identical versions? bp |
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From: Jon A. <jon...@du...> - 2010-06-15 16:06:38
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I've created a custom 404 error page for treebase. If you've got better wording, please send it to me and I'll update it. Example: http://www.treebase.org/cgi-bin/treebase.pl?TaxonID=T31183&Submit=Taxon+ID An alternative wording could be: Sorry, Page, not found. :-) -Jon ------------------------------------------------------- Jon Auman Systems Administrator National Evolutionary Synthesis Center Duke University http:www.nescent.org jon...@ne... ------------------------------------------------------ |
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From: Jon A. <jon...@du...> - 2010-06-15 15:10:41
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Yes, they are the same version. They are exactly the same bytes in size, and I copied from dev instance to production. -Jon On Jun 15, 2010, at 9:36 AM, William Piel wrote: > > On Jun 14, 2010, at 11:22 AM, Vladimir Gapeyev wrote: > >>> Has a new build been triggered yet? It would be nice to see this on >>> production. >> >> According to Jon, deployed to production this morning. > > Thanks Vladimir. > > This is a bit odd because the lat/longs are not showing up in the NeXML of these matrices: > > http://purl.org/phylo/treebase/phylows/matrix/TB2:M5572?format=nexml > http://purl.org/phylo/treebase/phylows/matrix/TB2:M5212?format=nexml > > ... yet they should be there. > > Can we confirm that, indeed, the dev and prod builds are identical versions? > > bp > > > > ------------------------------------------------------------------------------ > ThinkGeek and WIRED's GeekDad team up for the Ultimate > GeekDad Father's Day Giveaway. ONE MASSIVE PRIZE to the > lucky parental unit. See the prize list and enter to win: > http://p.sf.net/sfu/thinkgeek-promo > _______________________________________________ > Treebase-devel mailing list > Tre...@li... > https://lists.sourceforge.net/lists/listinfo/treebase-devel ------------------------------------------------------- Jon Auman Systems Administrator National Evolutionary Synthesis Center Duke University http:www.nescent.org jon...@ne... ------------------------------------------------------ |
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From: Rutger V. <rut...@gm...> - 2010-06-15 16:07:59
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There was a bug in my code that caused the coordinates to not be attached under some (but not all, hence my initial confusion) circumstances. I just committed a fix. When we do another deployment the coordinates should show up in the produced output. On Tue, Jun 15, 2010 at 4:10 PM, Jon Auman <jon...@du...> wrote: > Yes, they are the same version. They are exactly the same bytes in size, and > I copied from dev instance to production. > -Jon > On Jun 15, 2010, at 9:36 AM, William Piel wrote: > > On Jun 14, 2010, at 11:22 AM, Vladimir Gapeyev wrote: > > Has a new build been triggered yet? It would be nice to see this on > > production. > > According to Jon, deployed to production this morning. > > Thanks Vladimir. > > This is a bit odd because the lat/longs are not showing up in the NeXML of > these matrices: > > http://purl.org/phylo/treebase/phylows/matrix/TB2:M5572?format=nexml > http://purl.org/phylo/treebase/phylows/matrix/TB2:M5212?format=nexml > > ... yet they should be there. > > Can we confirm that, indeed, the dev and prod builds are identical versions? > > bp > > > > ------------------------------------------------------------------------------ > ThinkGeek and WIRED's GeekDad team up for the Ultimate > GeekDad Father's Day Giveaway. ONE MASSIVE PRIZE to the > lucky parental unit. See the prize list and enter to win: > http://p.sf.net/sfu/thinkgeek-promo > _______________________________________________ > Treebase-devel mailing list > Tre...@li... > https://lists.sourceforge.net/lists/listinfo/treebase-devel > > ------------------------------------------------------- > Jon Auman > Systems Administrator > National Evolutionary Synthesis Center > Duke University > http:www.nescent.org > jon...@ne... > ------------------------------------------------------ > > > > ------------------------------------------------------------------------------ > ThinkGeek and WIRED's GeekDad team up for the Ultimate > GeekDad Father's Day Giveaway. ONE MASSIVE PRIZE to the > lucky parental unit. See the prize list and enter to win: > http://p.sf.net/sfu/thinkgeek-promo > _______________________________________________ > Treebase-devel mailing list > Tre...@li... > https://lists.sourceforge.net/lists/listinfo/treebase-devel > > -- Dr. Rutger A. Vos School of Biological Sciences Philip Lyle Building, Level 4 University of Reading Reading RG6 6BX United Kingdom Tel: +44 (0) 118 378 7535 http://www.nexml.org http://rutgervos.blogspot.com |
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From: Jon A. <jon...@du...> - 2010-06-15 17:11:34
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I updated production with the latest build. Bill, can you check to see if the coordinates show up now? thanks, Jon On Jun 15, 2010, at 12:07 PM, Rutger Vos wrote: > There was a bug in my code that caused the coordinates to not be > attached under some (but not all, hence my initial confusion) > circumstances. I just committed a fix. When we do another deployment > the coordinates should show up in the produced output. > > On Tue, Jun 15, 2010 at 4:10 PM, Jon Auman <jon...@du...> wrote: >> Yes, they are the same version. They are exactly the same bytes in size, and >> I copied from dev instance to production. >> -Jon >> On Jun 15, 2010, at 9:36 AM, William Piel wrote: >> >> On Jun 14, 2010, at 11:22 AM, Vladimir Gapeyev wrote: >> >> Has a new build been triggered yet? It would be nice to see this on >> >> production. >> >> According to Jon, deployed to production this morning. >> >> Thanks Vladimir. >> >> This is a bit odd because the lat/longs are not showing up in the NeXML of >> these matrices: >> >> http://purl.org/phylo/treebase/phylows/matrix/TB2:M5572?format=nexml >> http://purl.org/phylo/treebase/phylows/matrix/TB2:M5212?format=nexml >> >> ... yet they should be there. >> >> Can we confirm that, indeed, the dev and prod builds are identical versions? >> >> bp >> >> >> >> ------------------------------------------------------------------------------ >> ThinkGeek and WIRED's GeekDad team up for the Ultimate >> GeekDad Father's Day Giveaway. ONE MASSIVE PRIZE to the >> lucky parental unit. See the prize list and enter to win: >> http://p.sf.net/sfu/thinkgeek-promo >> _______________________________________________ >> Treebase-devel mailing list >> Tre...@li... >> https://lists.sourceforge.net/lists/listinfo/treebase-devel >> >> ------------------------------------------------------- >> Jon Auman >> Systems Administrator >> National Evolutionary Synthesis Center >> Duke University >> http:www.nescent.org >> jon...@ne... >> ------------------------------------------------------ >> >> >> >> ------------------------------------------------------------------------------ >> ThinkGeek and WIRED's GeekDad team up for the Ultimate >> GeekDad Father's Day Giveaway. ONE MASSIVE PRIZE to the >> lucky parental unit. See the prize list and enter to win: >> http://p.sf.net/sfu/thinkgeek-promo >> _______________________________________________ >> Treebase-devel mailing list >> Tre...@li... >> https://lists.sourceforge.net/lists/listinfo/treebase-devel >> >> > > > > -- > Dr. Rutger A. Vos > School of Biological Sciences > Philip Lyle Building, Level 4 > University of Reading > Reading > RG6 6BX > United Kingdom > Tel: +44 (0) 118 378 7535 > http://www.nexml.org > http://rutgervos.blogspot.com ------------------------------------------------------- Jon Auman Systems Administrator National Evolutionary Synthesis Center Duke University http:www.nescent.org jon...@ne... ------------------------------------------------------ |
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From: William P. <wil...@ya...> - 2010-06-15 17:18:32
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On Jun 15, 2010, at 1:11 PM, Jon Auman wrote: > I updated production with the latest build. Bill, can you check to see if the coordinates show up now? > > thanks, > Jon it works! Many thanks. bp |
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From: Rutger V. <rut...@gm...> - 2010-06-15 17:22:35
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On Tue, Jun 15, 2010 at 6:18 PM, William Piel <wil...@ya...> wrote: > > On Jun 15, 2010, at 1:11 PM, Jon Auman wrote: > >> I updated production with the latest build. Bill, can you check to see if the coordinates show up now? >> >> thanks, >> Jon > > it works! Sweet. -- Dr. Rutger A. Vos School of Biological Sciences Philip Lyle Building, Level 4 University of Reading Reading RG6 6BX United Kingdom Tel: +44 (0) 118 378 7535 http://www.nexml.org http://rutgervos.blogspot.com |
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