Re: [Treebase-devel] harvesting

[Rutger V. <rut...@gm...>]

By the way, wouldn't it a good idea if instead we could simply share an
image of the entire treebase environment? I heard PFAM has just started
doing that and it might be a good idea if we want to entice volunteer
developers.

On Fri, Jan 27, 2012 at 4:21 PM, William Piel <met...@gm...> wrote:

>
> On Jan 27, 2012, at 6:48 AM, Rutger Vos wrote:
>
> Ok, I will look at that before trying to suck down too much.
>
>
> Or perhaps "means-test" each study: first request the NEXUS file, but if
> the NTAX x NCHAR is too big (e.g. over 1 million characters for S12156)
> then use nexml.org to convert the NEXUS to NeXML instead of requesting
> the NeXML directly from TreeBASE (you lose the metadata, but it's better
> than nothing). Otherwise, if the NEXUS is sufficiently small, make a second
> request for the NeXML.
>
> bp
>
>
>
>
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-- 
Dr. Rutger A. Vos
Bioinformaticist
NCB Naturalis
Visiting address: Einsteinweg 2, 2333 CC, Leiden, the Netherlands
Mailing address: Postbus 9517, 2300 RA, Leiden, the Netherlands
http://rutgervos.blogspot.com