Re: [Treebase-devel] phylowidget issue

[Hilmar L. <hl...@ne...>]

Yeah - I thought editing is a requirement. If it's not switching to  
the more lightweight jsPhyloSVG seems favorable to me too.

	-hilmar

On Nov 1, 2010, at 9:52 AM, Rutger Vos wrote:

> Did you hear that jsPhyloSVG now supports NeXML? I think it's an
> alternative to PhyloWidget that is worth considering, though there are
> also downsides - primarily that it doesn't allow editing of trees.
>
> On Mon, Nov 1, 2010 at 3:13 AM, Hilmar Lapp <hl...@ne...> wrote:
>>
>> On Oct 29, 2010, at 11:28 AM, William Piel wrote:
>>
>> Why would this be the case for some trees but not others? I'm  
>> guessing that
>> instead of writing the newick on the fly, TreeBASE is just grabbing  
>> the
>> newick string from a stored version (table: phylotree field:  
>> newickstring),
>> and for some reason the stored version is missing a semicolon  
>> (could be that
>> the authors rerooted the trees using our reroot tool, and our  
>> reroot tool
>> has a bug wherein it doesn't return a string with a semicolon --  
>> hence why
>> we don't see this problem with all trees).
>>
>> Is that bug in the tracker? Is it difficult to fix? I.e., is this  
>> more
>> complicated than finding the property setter and changing it so  
>> that it
>> makes sure that there is always a semicolon at the end?
>> -hilmar
>> --
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>>
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>
>
>
> -- 
> Dr. Rutger A. Vos
> School of Biological Sciences
> Philip Lyle Building, Level 4
> University of Reading
> Reading
> RG6 6BX
> United Kingdom
> Tel: +44 (0) 118 378 7535
> http://www.nexml.org
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-- 
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: Hilmar Lapp  -:- Durham, NC -:- informatics.nescent.org :
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