Re: [Treebase-devel] Open Provenance

[Hilmar L. <hl...@ne...>]

Val - that's great to hear and, yes, now that you remind me I do  
recall. What are your thoughts on OPM?

	-hilmar

On Jun 14, 2010, at 11:17 AM, Val Tannen wrote:

> I am very much involved in the data provenance community. This is
> in fact my main research area. On my web page there are some slides
> on a recent talk (http://www.cis.upenn.edu/~val/EDBTkeynoteLausanne.pdf 
> )
>
> And on the workflow side of pPOD, yes we have used phylogenetic  
> examples, as Bertram must have told you.
>
> I would be keen to work with anybody interested on provenance in  
> TreeBASE.
>
> Val
>
>
>
>
> On Jun 13, 2010, at 9:14 PM, Hilmar Lapp wrote:
>
>> I don't know whether this has been considered already in the past,  
>> but
>> it certainly seems relevant to TreeBASE, more so than ever with the
>> analysis steps annotation that is now required from depositors - it
>> looks to me that this might essentially be the standard for exposing
>> them.
>>
>> The Open Provenance Model Core Specification (v1.1)
>> http://eprints.ecs.soton.ac.uk/18332/1/opm.pdf
>>
>> BTW there is a summer student internship project sponsored by DataONE
>> on data provenance:
>> http://groups.google.com/group/datatol
>>
>> Bertram Ludäscher wanted a phylogenetics-oriented use-case too, and  
>> it
>> seems to me like the analysis steps that connect input data with
>> alignment and output tree could be a great example.
>>
>> 	-hilmar
>> -- 
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>> : Hilmar Lapp  -:- Durham, NC -:- informatics.nescent.org :
>> ===========================================================
>>
>>
>>
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===========================================================
: Hilmar Lapp  -:- Durham, NC -:- informatics.nescent.org :
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