[Treebase-guts] SF.net SVN: treebase:[716] trunk/treebase-core/src/main/java/org/cipres/ treebase

[<rv...@us...>]

Revision: 716
          http://treebase.svn.sourceforge.net/treebase/?rev=716&view=rev
Author:   rvos
Date:     2010-06-04 11:28:42 +0000 (Fri, 04 Jun 2010)

Log Message:
-----------
Adding interfaces and implementations of findByTB1LegacyId and findVariantByTB1LegacyId

Modified Paths:
--------------
    trunk/treebase-core/src/main/java/org/cipres/treebase/dao/taxon/TaxonDAO.java
    trunk/treebase-core/src/main/java/org/cipres/treebase/domain/taxon/TaxonHome.java

Modified: trunk/treebase-core/src/main/java/org/cipres/treebase/dao/taxon/TaxonDAO.java
===================================================================
--- trunk/treebase-core/src/main/java/org/cipres/treebase/dao/taxon/TaxonDAO.java	2010-06-04 11:27:31 UTC (rev 715)
+++ trunk/treebase-core/src/main/java/org/cipres/treebase/dao/taxon/TaxonDAO.java	2010-06-04 11:28:42 UTC (rev 716)
@@ -150,4 +150,24 @@
 		}
 		return result;
 	}
+
+	/*
+	 * (non-Javadoc)
+	 * @see org.cipres.treebase.domain.taxon.TaxonHome#findByTB1LegacyId(java.lang.Integer)
+	 */
+	public Taxon findByTB1LegacyId(Integer tb1LegacyId) {
+		Criteria c = getSession().createCriteria(Taxon.class);
+		c.add(Expression.eq("TB1LegacyId", tb1LegacyId));
+		return (Taxon) c.uniqueResult();
+	}
+
+	/*
+	 * (non-Javadoc)
+	 * @see org.cipres.treebase.domain.taxon.TaxonHome#findVariantByTB1LegacyId(java.lang.Integer)
+	 */
+	public TaxonVariant findVariantByTB1LegacyId(Integer tb1LegacyId) {
+		Criteria c = getSession().createCriteria(TaxonVariant.class);
+		c.add(Expression.eq("TB1LegacyId", tb1LegacyId));
+		return (TaxonVariant) c.uniqueResult();
+	}
 }

Modified: trunk/treebase-core/src/main/java/org/cipres/treebase/domain/taxon/TaxonHome.java
===================================================================
--- trunk/treebase-core/src/main/java/org/cipres/treebase/domain/taxon/TaxonHome.java	2010-06-04 11:27:31 UTC (rev 715)
+++ trunk/treebase-core/src/main/java/org/cipres/treebase/domain/taxon/TaxonHome.java	2010-06-04 11:28:42 UTC (rev 716)
@@ -85,14 +85,30 @@
 	Taxon findByNcbiTaxId(Integer genbankId);
 	
 	/**
-	 * Find the taxon that has the specified NCBI genBank ID
+	 * Find the taxon that has the specified uBio namebank ID
 	 * 
 	 * Throw an exception if there are multiple matches
 	 * 
-	 * @param genbankId
+	 * @param nameBankId
 	 * @return the taxon object, or null if none is found
 	 * @author mjd 20080821
 	 * @throws NonUniqueObjectException
 	 */
 	Taxon findByUBIOTaxId(Long nameBankId);
+	
+	/**
+	 * Find the taxon that has the specified TreeBASE1 legacy ID
+	 * 
+	 * @param tb1LegacyId
+	 * @return the taxon object, or null if none is found
+	 */
+	Taxon findByTB1LegacyId(Integer tb1LegacyId);
+	
+	/**
+	 * Find the taxonVariant that has the specified TreeBASE1 legacy ID
+	 * 
+	 * @param tb1LegacyId
+	 * @return the taxonVariant object, or null if none is found
+	 */	
+	TaxonVariant findVariantByTB1LegacyId(Integer tb1LegacyId);
 }


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