[Treebase-devel] Fwd: [[treebase-bugs] #7718] error message when submitting nexus file

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Hi Jon,

Is this a RAM outage or a disc space issue?

"No space left on device at org.apache.commons.fileupload.FileUploadBase.parseRequest"

bp

Begin forwarded message:

> From: "Torbjørn Ekrem via RT" <bu...@tr...>
> Date: April 1, 2010 8:31:41 AM CDT
> To: undisclosed-recipients: ;
> Subject: [[treebase-bugs] #7718] error message when submitting nexus file 
> Reply-To: bu...@tr...
> 
> 
> Thu Apr 01 09:31:40 2010: Request 7718 was acted upon.
> Transaction: Ticket created by Tor...@vm...
>       Queue: Treebase-bugs
>     Subject: error message when submitting nexus file
>       Owner: Nobody
>  Requestors: Tor...@vm...
>      Status: new
> Ticket <URL: https://help.nescent.org/Ticket/Display.html?id=7718 >
> 
> 
> Hi,
> 
> I tried to upload a nexus-file that is successfully parsed in Mesquite today,
> and got the below error message. Is there anything that I might have overlooked
> or is this perhaps a bug. The file is not very large (about 270 kb) and include
> taxa, characters and trees blocks.
> 
> Best regards,
> Torbjørn
> 
> -- 
> Dr. Torbjørn Ekrem
> Systematikk og evolusjonsgruppa
> NTNU Vitenskapsmuseet         
> Seksjon for naturhistorie      
> 7491 Trondheim                 
> 
> Systematics and Evolution Group
> Museum of Natural History and Archaeology
> Norwegian University of Science and Technology
> NO-7491 Trondheim, Norway
> 
> Tel: +47 73 59 78 12
> Email: Tor...@vm...Web: www.ntnu.no/~torbjoe
> Uncaught Exception Encountered
> 
> 
> org.springframework.web.multipart.MultipartException: Could not parse multipart
> servlet request; nested exception is
> org.apache.commons.fileupload.FileUploadBase$IOFileUploadException: Processing
> of multipart/form-data request failed. No space left on device Caused by:
> org.apache.commons.fileupload.FileUploadBase$IOFileUploadException: Processing
> of multipart/form-data request failed. No space left on device at
> org.apache.commons.fileupload.FileUploadBase.parseRequest(FileUploadBase.java:359)
> at
> org.apache.commons.fileupload.servlet.ServletFileUpload.parseRequest(ServletFileUpload.java:126)
> at
> org.cipres.treebase.web.controllers.AjaxMultipartResolver.resolveMultipart(AjaxMultipartResolver.java:35)
> at
> org.springframework.web.servlet.DispatcherServlet.checkMultipart(DispatcherServlet.java:980)
> at
> org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:834)
> at
> org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:792)
> at
> org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:476)
> at
> org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:441)
> at javax.servlet.http.HttpServlet.service(HttpServlet.java:647) at
> javax.servlet.http.HttpServlet.service(HttpServlet.java:729) at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:269)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> at
> org.tuckey.web.filters.urlrewrite.RuleChain.handleRewrite(RuleChain.java:164)
> at org.tuckey.web.filters.urlrewrite.RuleChain.doRules(RuleChain.java:141) at
> org.tuckey.web.filters.urlrewrite.UrlRewriter.processRequest(UrlRewriter.java:90)
> at
> org.tuckey.web.filters.urlrewrite.UrlRewriteFilter.doFilter(UrlRewriteFilter.java:406)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> at
> org.displaytag.filter.ResponseOverrideFilter.doFilter(ResponseOverrideFilter.java:125)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> at
> org.springframework.orm.hibernate3.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:198)
> at
> org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:75)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> at
> com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119)
> at
> com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> at
> org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:264)
> at
> org.acegisecurity.intercept.web.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:107)
> at
> org.acegisecurity.intercept.web.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:72)
> at
> org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274)
> at
> org.acegisecurity.ui.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:110)
> at
> org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274)
> at
> org.acegisecurity.wrapper.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:81)
> at
> org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274)
> at
> org.acegisecurity.ui.AbstractProcessingFilter.doFilter(AbstractProcessingFilter.java:217)
> at
> org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274)
> at
> org.acegisecurity.context.HttpSessionContextIntegrationFilter.doFilter(HttpSessionContextIntegrationFilter.java:191)
> at
> org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274)
> at org.acegisecurity.util.FilterChainProxy.doFilter(FilterChainProxy.java:148)
> at org.acegisecurity.util.FilterToBeanProxy.doFilter(FilterToBeanProxy.java:90)
> at
> org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:215)
> at
> org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> at
> org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:213)
> at
> org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:172)
> at
> org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
> at
> org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
> at
> org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:108)
> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:174)
> at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:873)
> at
> org.apache.coyote.http11.Http11BaseProtocol$Http11ConnectionHandler.processConnection(Http11BaseProtocol.java:665)
> at
> org.apache.tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java:528)
> at
> org.apache.tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
> at
> org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:689)
> at java.lang.Thread.run(Thread.java:636) Caused by: java.io.IOException: No
> space left on device at java.io.FileOutputStream.writeBytes(Native Method) at
> java.io.FileOutputStream.write(FileOutputStream.java:297) at
> org.apache.commons.io.output.ByteArrayOutputStream.writeTo(ByteArrayOutputStream.java:217)
> at
> org.apache.commons.io.output.DeferredFileOutputStream.thresholdReached(DeferredFileOutputStream.java:124)
> at
> org.apache.commons.io.output.ThresholdingOutputStream.checkThreshold(ThresholdingOutputStream.java:220)
> at
> org.apache.commons.io.output.ThresholdingOutputStream.write(ThresholdingOutputStream.java:127)
> at org.apache.commons.fileupload.util.Streams.copy(Streams.java:101) at
> org.apache.commons.fileupload.util.Streams.copy(Streams.java:64) at
> org.apache.commons.fileupload.FileUploadBase.parseRequest(FileUploadBase.java:354)
> ... 56 more Cookies:
> itemToHighlight=[http%3A//www.treebase.org/treebase-web/user/uploadFile.html]
> JSESSIONID=[4159496F4E66A78FD91DB3E51F4833F3]
> 