From: <vga...@us...> - 2010-03-09 22:27:34
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Revision: 534 http://treebase.svn.sourceforge.net/treebase/?rev=534&view=rev Author: vgapeyev Date: 2010-03-09 22:27:21 +0000 (Tue, 09 Mar 2010) Log Message: ----------- A directory to keep track of data cleaning tasks Modified Paths: -------------- trunk/treebase-core/db/schema/TODO.txt Added Paths: ----------- trunk/treebase-core/db/cleaning/ trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/ trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/README.txt trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/fixlabels_trans.pl trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/output.txt trunk/treebase-core/db/cleaning/README.txt trunk/treebase-core/db/cleaning/TODO.txt Added: trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/README.txt =================================================================== --- trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/README.txt (rev 0) +++ trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/README.txt 2010-03-09 22:27:21 UTC (rev 534) @@ -0,0 +1,22 @@ +A perl script from Bill to remove duplicate taxon labels. + +Before running, adjust passwords in fixlabels_trans.pl + +Was run 2010-03-03, after Dec'2009 matrices and trees were loaded, but prior to loading Dec'2009 Taxon intelligence. + +output.txt contains the output from this script. + +The stdout was: +The database starts with 101401 redundant records. +The database ends with 0 redundant records. + + + +This query checks whether there are duplicate taxon labels. + +SELECT COUNT(*) FROM +(SELECT study_id, taxonlabel, COUNT(taxonlabel_id) +FROM taxonlabel WHERE study_id IS NOT NULL +GROUP BY study_id, taxonlabel HAVING COUNT(taxonlabel_id) > 1 +ORDER BY COUNT(taxonlabel_id) DESC) AS countrecs; + Added: trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/fixlabels_trans.pl =================================================================== --- trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/fixlabels_trans.pl (rev 0) +++ trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/fixlabels_trans.pl 2010-03-09 22:27:21 UTC (rev 534) @@ -0,0 +1,167 @@ +#!/usr/bin/perl + +use strict; +use warnings; +use DBI; + +# This script is intended to remove all taxonlabel records that are duplicates within the +# same study. We start by getting a list of all studies. Then for each study_id, we get +# a unique list of taxonlabels, picking from among the duplicates one taxonlabel_id that +# will survive the culling; then we pick out a taxonvariant_id so that we can be sure that +# the surviving taxonlabel has a mapping to taxonvariants. For each taxonlabel_id that +# is destined to be deleted, we first update all tables that use it as a foreign key +# and modify them to use the taxonlabel_id of the surviving record. Note that we cannot +# just update the corresponding record in sub_taxonlabel because that would violate the +# constraint that taxonlabel_id in sub_taxonlabel be unique. Instead, we delete any +# sub_taxonlabel records that have a taxonlabel_id that is determined to be redundant. + +# For a local database: + +my $database = "tb2synops"; +my $username = "piel"; +my $password = ""; + +# For the remote database, uncomment this (and also uncomment line 142): + +# my $database = "treebasedev"; +# my $username = "treebase_app"; +# my $password = "tim5tema"; + + +my $dbh = &ConnectToPg($database, $username, $password); + +# Let's start by counting the number of redundant taxonlabel_ids: + +my $count = q|SELECT COUNT(*) FROM |; +$count .= q|(SELECT study_id, taxonlabel, COUNT(taxonlabel_id) |; +$count .= q|FROM taxonlabel WHERE study_id IS NOT NULL |; +$count .= q|GROUP BY study_id, taxonlabel HAVING COUNT(taxonlabel_id) > 1 |; +$count .= q|ORDER BY COUNT(taxonlabel_id) DESC) AS countrecs |; + +my $totRec = $dbh->selectrow_array ($count); +print "The database starts with $totRec redundant records.\n"; + +# Assuming that the study_id column in taxonlabel is accurate, +# lets get a distinct list of all study_ids + +my $query = q|SELECT DISTINCT study_id FROM taxonlabel WHERE study_id IS NOT NULL |; + +my $sth = $dbh->prepare($query) +or die "Can't prepare $query: $dbh->errstr\n"; +my $rv = $sth->execute +or die "can't execute the query: $sth->errstr\n"; + +my @studyids; #unique list of all study_ids, as taken from the taxonlabel table + +while(my @row = $sth->fetchrow_array) { + push(@studyids, $row[0]); +} +my $rd = $sth->finish; + +$query = qq|SELECT taxonlabel, MIN(taxonlabel_id), MAX(taxonvariant_id) FROM taxonlabel |; +$query .= qq|WHERE study_id = ? GROUP BY taxonlabel HAVING COUNT(taxonlabel_id) > 1 |; +my $sth_getuniques = $dbh->prepare($query) or die "Can't prepare $query: $dbh->errstr\n"; + +my $file ="output.txt"; +open(OUTPUT,">$file") || die "Content-type: text/html\n\nCannot open $file!"; + +foreach my $stid ( @studyids ) { + my %taxonlabels; + + # get a unique list of taxonlabel values and store the lowest taxonlabel_id, + # and the highest taxonvariant_id + + my $rv = $sth_getuniques->execute( $stid ); + while(my @row = $sth_getuniques->fetchrow_array) { + $taxonlabels{ $row[0] } = [ $row[1], $row[2] ]; + } + my $rd = $sth_getuniques->finish; + + # get a list of taxonlabel_ids that need to be deleted (ie they are redundant) + $query = qq|SELECT taxonlabel_id FROM taxonlabel WHERE taxonlabel = ? AND study_id = ? AND taxonlabel_id <> ? |; + my $sth_getdups = $dbh->prepare($query) or die "Can't prepare $query: $dbh->errstr\n"; + + foreach my $uniquetaxonlabel ( keys(%taxonlabels) ) { + + eval { + my $dup_taxlabid; + my $rv = $sth_getdups->execute( $uniquetaxonlabel, $stid, $taxonlabels{$uniquetaxonlabel}[0] ); + while(my @row = $sth_getdups->fetchrow_array) { + $dup_taxlabid = $row[0]; + + # first check that the sub_taxonlabel table has a record for the surviving taxonlabel_id + + my $sub_taxonlabel_count = "SELECT COUNT(*) FROM sub_taxonlabel WHERE taxonlabel_id = " . $taxonlabels{$uniquetaxonlabel}[0] ; + my $sub_totRec = $dbh->selectrow_array ($sub_taxonlabel_count); + + if ( $sub_totRec == 1) { + + # now that we have a taxonlabel_id that can be deleted, let's update all records in + # other tables that use this id so that they use the taxonlabel_id of the surviving taxonlabel record + + # we are ready to delete the sub_taxonlabel record that has our $dup_taxlabid + $dbh->do( "DELETE FROM sub_taxonlabel WHERE taxonlabel_id = ? ", undef, $dup_taxlabid ); + + # let's update the tables that have a FK with $dup_taxlabid so that they point to the surviving record + foreach my $tble ( 'phylotreenode', 'rowsegment', 'taxonlabelgroup_taxonlabel', 'taxonlabelset_taxonlabel', 'matrixrow' ) { + $dbh->do( "UPDATE $tble SET taxonlabel_id = ? WHERE taxonlabel_id = ? ", undef, $taxonlabels{$uniquetaxonlabel}[0], $dup_taxlabid ); + } + + # now we are ready to delete this redundant taxonlabel record + $dbh->do( "DELETE FROM taxonlabel WHERE taxonlabel_id = ? ", undef, $dup_taxlabid ); + + # optionally: print out a list of all deleted taxonlabel records + print OUTPUT "study $stid: taxonlabel $uniquetaxonlabel: $dup_taxlabid deleted in favor of $taxonlabels{$uniquetaxonlabel}[0]\n"; + } elsif ($sub_totRec == 0) { + print "Whoops... sub_taxonlabel lacks a record for the surviving taxonlabel_id $taxonlabels{$uniquetaxonlabel}[0] \n"; + } else { + print "Whoops... I didn't expect sub_taxonlabel to have $sub_totRec records with taxonlabel_id $taxonlabels{$uniquetaxonlabel}[0] \n"; + print " > $sub_taxonlabel_count\n"; + } + + } + my $rd = $sth_getdups->finish; + + # Make sure that the surviving taxonlabel has a taxonvariant_id + $dbh->do( "UPDATE taxonlabel SET taxonvariant_id = ? WHERE taxonlabel_id = ? ", undef, $taxonlabels{$uniquetaxonlabel}[1], $taxonlabels{$uniquetaxonlabel}[0] ); + + # If no errors so far, let's commit this set of changes + $dbh->commit(); + }; + + if ($@) { + warn "Failed to fix $uniquetaxonlabel: $@\n"; + $dbh->rollback(); + } + + } +} + +close(OUTPUT); + +$totRec = $dbh->selectrow_array ($count); +print "The database ends with $totRec redundant records.\n"; + + +my $rc = $dbh->disconnect; + + + +# Connect to Postgres using DBI +#============================================================== +sub ConnectToPg { + + my ($cstr, $user, $pass) = @_; + + $cstr = "DBI:Pg:dbname="."$cstr"; + # uncomment this to run against the server at NESCent: + # $cstr .= ";host=treebasedb-dev.nescent.org"; + + + my $dbh = DBI->connect($cstr, $user, $pass, {AutoCommit => 0, PrintError => 1, RaiseError => 1}); + $dbh || &error("DBI connect failed : ",$dbh->errstr); + + return($dbh); +} + + Property changes on: trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/fixlabels_trans.pl ___________________________________________________________________ Added: svn:executable + * Added: trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/output.txt =================================================================== --- trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/output.txt (rev 0) +++ trunk/treebase-core/db/cleaning/2010-03-03_fixlabels/output.txt 2010-03-09 22:27:21 UTC (rev 534) @@ -0,0 +1,101409 @@ +study 1074: taxonlabel Gaertneriomyces semiglobiferus: 141235 deleted in favor of 18109 +study 1074: taxonlabel Spizellomyces plurigibbosus: 141242 deleted in favor of 18114 +study 1074: taxonlabel Orpinomyces sp: 141218 deleted in favor of 18091 +study 1074: taxonlabel Anaeromyces K9: 141226 deleted in favor of 18100 +study 1074: taxonlabel Powellomyces sp: 141223 deleted in favor of 18111 +study 1074: taxonlabel Anaeromyces sp AUC2: 141224 deleted in favor of 18104 +study 1074: taxonlabel Spizellomyces kniepii: 141219 deleted in favor of 18113 +study 1074: taxonlabel Rhizophlyctis rosea: 141244 deleted in favor of 13180 +study 1074: taxonlabel Anaeromyces sp: 141222 deleted in favor of 18097 +study 1074: taxonlabel Anaeromyces JF1: 141234 deleted in favor of 18093 +study 1074: taxonlabel Orpinomyces sp 1: 141241 deleted in favor of 18101 +study 1074: taxonlabel Anaeromyces K5: 141220 deleted in favor of 18107 +study 1074: taxonlabel Piromyces PrI: 141236 deleted in favor of 18103 +study 1074: taxonlabel Neocallimastix patriciarum: 141230 deleted in favor of 18099 +study 1074: taxonlabel Piromyces polycephalus: 141237 deleted in favor of 18105 +study 1074: taxonlabel Kochiomyces dichotomus: 141233 deleted in favor of 18110 +study 1074: taxonlabel Spizellomyces pseudodichotomus: 141231 deleted in favor of 18108 +study 1074: taxonlabel Neocallimastix hurleyensis: 141232 deleted in favor of 18089 +study 1074: taxonlabel Anaeromyces sp AUC1: 141229 deleted in favor of 18094 +study 1074: taxonlabel Orpinomyces sp 2: 141217 deleted in favor of 18090 +study 1074: taxonlabel Anaeromyces BF1: 141225 deleted in favor of 18096 +study 1074: taxonlabel Orpinomyces KF1: 141238 deleted in favor of 18098 +study 1074: taxonlabel Orpinomyces KF2: 141239 deleted in favor of 18095 +study 1074: taxonlabel Orpinomyces KF3: 141221 deleted in favor of 18102 +study 1074: taxonlabel Caecomyces communis: 141228 deleted in favor of 18092 +study 1074: taxonlabel Neocallimastix frontalis SR4: 141240 deleted in favor of 18106 +study 1548: taxonlabel Gnetum urens: 172470 deleted in favor of 7378 +study 1548: taxonlabel Encephalartos altensteinii: 172456 deleted in favor of 31328 +study 1548: taxonlabel Gnetum sp Takeuchi7049: 172465 deleted in favor of 31302 +study 1548: taxonlabel Gnetum africanum: 172460 deleted in favor of 7345 +study 1548: taxonlabel Gnetum paniculatum: 172453 deleted in favor of 31299 +study 1548: taxonlabel Gnetum raya: 172449 deleted in favor of 31308 +study 1548: taxonlabel Gnetum hainanense Won600: 172448 deleted in favor of 31306 +study 1548: taxonlabel Taxus baccata: 172476 deleted in favor of 7398 +study 1548: taxonlabel Cycas taitungensis: 172463 deleted in favor of 31323 +study 1548: taxonlabel Gnetum schwackeanum: 172486 deleted in favor of 31300 +study 1548: taxonlabel Gnetum parvifolium: 172457 deleted in favor of 7350 +study 1548: taxonlabel Cupressus sempervirens: 172480 deleted in favor of 29195 +study 1548: taxonlabel Gnetum tenuifolium: 172478 deleted in favor of 31316 +study 1548: taxonlabel Gnetum cuspidatum: 172477 deleted in favor of 31307 +study 1548: taxonlabel Picea rubens: 172443 deleted in favor of 31327 +study 1548: taxonlabel Gnetum nodiflorum: 172435 deleted in favor of 7356 +study 1548: taxonlabel Gnetum acutum: 172459 deleted in favor of 31304 +study 1548: taxonlabel Gnetum latifolium Won575: 172432 deleted in favor of 31312 +study 1548: taxonlabel Gnetum hainanense Won580: 172433 deleted in favor of 31313 +study 1548: taxonlabel Cunninghamia lanceolata: 172472 deleted in favor of 31330 +study 1548: taxonlabel Gnetum montanum: 172430 deleted in favor of 7414 +study 1548: taxonlabel Gnetum neglectum: 172461 deleted in favor of 31309 +study 1548: taxonlabel Gnetum diminutum: 172488 deleted in favor of 31315 +study 1548: taxonlabel Gnetum gnemon Ashby: 172479 deleted in favor of 31321 +study 1548: taxonlabel Gnetum gnemonoides: 172440 deleted in favor of 31320 +study 1548: taxonlabel Gnetum woodsonianum: 172471 deleted in favor of 31319 +study 1548: taxonlabel Magnolia denudata: 172439 deleted in favor of 31331 +study 1548: taxonlabel Nageia nagi: 172489 deleted in favor of 8057 +study 1548: taxonlabel Gnetum sp Harder5621: 172454 deleted in favor of 31301 +study 1548: taxonlabel Ephedra sinica: 172464 deleted in favor of 7353 +study 1548: taxonlabel Cephalotaxus oliveri: 172469 deleted in favor of 31334 +study 1548: taxonlabel Gnetum latifolium Won524: 172487 deleted in favor of 31322 +study 1548: taxonlabel Nuphar variegata: 172466 deleted in favor of 31325 +study 1548: taxonlabel Gnetum gnemon Won514: 172473 deleted in favor of 31305 +study 1548: taxonlabel Welwitschia AF280996: 172455 deleted in favor of 31329 +study 1548: taxonlabel Gnetum aff. latifolium Won545: 172474 deleted in favor of 31298 +study 1548: taxonlabel Ephedra trifurca: 172434 deleted in favor of 31324 +study 1548: taxonlabel Calocedrus decurrens: 172429 deleted in favor of 29189 +study 1548: taxonlabel Gnetum ula: 172484 deleted in favor of 31310 +study 1548: taxonlabel Agathis borneensis: 172483 deleted in favor of 31336 +study 1548: taxonlabel Gnetum microstachyum: 172462 deleted in favor of 31314 +study 1548: taxonlabel Phyllocladus trichomanoides: 172428 deleted in favor of 8061 +study 1548: taxonlabel Zamia floridana: 172452 deleted in favor of 18271 +study 1548: taxonlabel Gnetum hainanense RBGE: 172441 deleted in favor of 31311 +study 1548: taxonlabel Gnetum costatum: 172468 deleted in favor of 7359 +study 1548: taxonlabel Bowenia serrulata: 172431 deleted in favor of 7416 +study 1548: taxonlabel Gnetum klossii: 172447 deleted in favor of 31317 +study 1548: taxonlabel Gnetum aff. latifolium SAN151116: 172475 deleted in favor of 31297 +study 1548: taxonlabel Abies firma: 172481 deleted in favor of 31335 +study 1548: taxonlabel Gnetum macrostachyum: 172450 deleted in favor of 31318 +study 1548: taxonlabel Gnetum gnemon clone: 172437 deleted in favor of 31332 +study 1548: taxonlabel Gnetum microcarpum: 172485 deleted in favor of 31303 +study 1548: taxonlabel Araucaria hunsteinii: 172467 deleted in favor of 31337 +study 1548: taxonlabel Gnetum hainanense: 172438 deleted in favor of 31333 +study 2026: taxonlabel Albugo candida ex. Biscutella laevig: 210693 deleted in favor of 78176 +study 2026: taxonlabel Albugo koreana CA2: 210686 deleted in favor of 78197 +study 2026: taxonlabel Albugo candida ex. Arabis turrita CA: 210655 deleted in favor of 78172 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA220: 210683 deleted in favor of 78209 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA10: 210658 deleted in favor of 78211 +study 2026: taxonlabel Albugo occidentalis AY286220: 210665 deleted in favor of 78191 +study 2026: taxonlabel Albugo candida ex. Descurainia sophi: 210678 deleted in favor of 78170 +study 2026: taxonlabel Albugo candida ex. Draba verna BP74: 210682 deleted in favor of 78210 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA220: 210674 deleted in favor of 78173 +study 2026: taxonlabel Pustula tragopogonis AY286221: 210694 deleted in favor of 78200 +study 2026: taxonlabel Albugo candida ex. Diplotaxis erucoi: 210689 deleted in favor of 78177 +study 2026: taxonlabel Wilsoniana portulacae CA17: 210663 deleted in favor of 78179 +study 2026: taxonlabel Albugo trianthemae CA50: 210673 deleted in favor of 78160 +study 2026: taxonlabel Albugo candida ex. Brassica juncea C: 210676 deleted in favor of 78169 +study 2026: taxonlabel Albugo lepidii ex. Lepidium apetalum: 210649 deleted in favor of 78167 +study 2026: taxonlabel Albugo candida ex. Iberis amara CA1: 210644 deleted in favor of 78193 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA319: 210660 deleted in favor of 78185 +study 2026: taxonlabel Albugo candida ex. Cardaminopsis hal: 210653 deleted in favor of 78182 +study 2026: taxonlabel Albugo candida ex. Lunaria sp. CU19: 210672 deleted in favor of 78207 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA319: 210675 deleted in favor of 78204 +study 2026: taxonlabel Albugo candida ex. Erysimum cuspidat: 210687 deleted in favor of 78174 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA10: 210652 deleted in favor of 78188 +study 2026: taxonlabel Albugo candida ex. Thlaspi arvense: 210647 deleted in favor of 78202 +study 2026: taxonlabel Albugo candida ex. Sisymbrium leteum: 210679 deleted in favor of 78175 +study 2026: taxonlabel Albugo candida ex. Aubrietia deltoid: 210661 deleted in favor of 78181 +study 2026: taxonlabel Albugo koreana CA3: 210643 deleted in favor of 78198 +study 2026: taxonlabel Albugo koreana ex. CA2: 210692 deleted in favor of 78180 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA219: 210681 deleted in favor of 78208 +study 2026: taxonlabel Albugo candida ex. Arabis turrita C: 210651 deleted in favor of 78194 +study 2026: taxonlabel Albugo candida ex. Draba lasiocarpa: 210666 deleted in favor of 78201 +study 2026: taxonlabel Albugo candida ex. Iberis amara CA18: 210664 deleted in favor of 78162 +study 2026: taxonlabel Albugo capparis ex. Capparis rupestr: 210667 deleted in favor of 78195 +study 2026: taxonlabel Albugo candida ex. Diptychocarpus st: 210645 deleted in favor of 78171 +study 2026: taxonlabel Albugo chardoni ex. Draba verna CA1: 210646 deleted in favor of 78199 +study 2026: taxonlabel Albugo candida ex. Eruca sativa CA2: 210680 deleted in favor of 78203 +study 2026: taxonlabel Albugo candida ex. C bursa pastoris: 210670 deleted in favor of 78189 +study 2026: taxonlabel Albugo candida ex. Berteroa incana C: 210650 deleted in favor of 78168 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA161: 210657 deleted in favor of 78192 +study 2026: taxonlabel Albugo candida ex. Berteroa incana: 210691 deleted in favor of 78206 +study 2026: taxonlabel Albugo sp. ex. Draba nemorosa CA219: 210684 deleted in favor of 78166 +study 2026: taxonlabel Albugo candida ex. Eruca sativa CA25: 210654 deleted in favor of 78184 +study 2026: taxonlabel Albugo chardoni ex. Cleome anomala C: 210685 deleted in favor of 78205 +study 2026: taxonlabel Albugo candida ex. Brassica juncea: 210677 deleted in favor of 78196 +study 2026: taxonlabel Albugo koreana ex. CA3: 210668 deleted in favor of 78161 +study 2026: taxonlabel Albugo candida ex. Raphanus sativus: 210648 deleted in favor of 78190 +study 2026: taxonlabel Albugo candida ex. Heliophila meyeri: 210669 deleted in favor of 78163 +study 2026: taxonlabel Albugo lepidii ex. Lepidium virginic: 210662 deleted in favor of 78186 +study 2026: taxonlabel Albugo ipomoeae panduratae CA25: 210659 deleted in favor of 78165 +study 2026: taxonlabel Albugo candida ex. Lunaria sp. CU19: 210656 deleted in favor of 78164 +study 2026: taxonlabel Albugo candida ex. Thlaspi arvense C: 210690 deleted in favor of 78183 +study 2026: taxonlabel Wilsoniana achyranthis CA19: 210671 deleted in favor of 78178 +study 2026: taxonlabel Wilsoniana bliti CA24: 210688 deleted in favor of 78187 +study 264: taxonlabel Richea B: 109718 deleted in favor of 19006 +study 264: taxonlabel Styphelia: 109697 deleted in favor of 19025 +study 264: taxonlabel Woollsia: 109713 deleted in favor of 19008 +study 264: taxonlabel Rupicola: 109698 deleted in favor of 19026 +study 264: taxonlabel Oligarrhena: 109721 deleted in favor of 19004 +study 264: taxonlabel Lebetanthus: 109710 deleted in favor of 19023 +study 264: taxonlabel Andersonia B: 109709 deleted in favor of 19019 +study 264: taxonlabel Gaultheria: 109715 deleted in favor of 19022 +study 264: taxonlabel Astroloma: 109719 deleted in favor of 19017 +study 264: taxonlabel Dracophyllum B: 109716 deleted in favor of 19014 +study 264: taxonlabel Melichrus: 109720 deleted in favor of 19009 +study 264: taxonlabel Dracophyllum A: 109712 deleted in favor of 19013 +study 264: taxonlabel Budawangia: 109704 deleted in favor of 19003 +study 264: taxonlabel Sprengelia: 109696 deleted in favor of 19020 +study 264: taxonlabel Cosmelia: 109708 deleted in favor of 19011 +study 264: taxonlabel Erica: 109706 deleted in favor of 19002 +study 264: taxonlabel Needhamiella: 109703 deleted in favor of 19024 +study 264: taxonlabel Lysinema: 109711 deleted in favor of 19015 +study 264: taxonlabel Sphenotoma: 109714 deleted in favor of 19010 +study 264: taxonlabel Prionotes: 109702 deleted in favor of 19001 +study 264: taxonlabel Richea A: 109707 deleted in favor of 19021 +study 264: taxonlabel Andersonia A: 109699 deleted in favor of 19012 +study 264: taxonlabel Dracophyllum C: 109701 deleted in favor of 19007 +study 264: taxonlabel Epacris: 109705 deleted in favor of 19018 +study 887: taxonlabel Diphysa humilis: 132218 deleted in favor of 819 +study 887: taxonlabel Ormocarpum rectangulare: 132184 deleted in favor of 9267 +study 887: taxonlabel Ormocarpum schliebenii: 132187 deleted in favor of 778 +study 887: taxonlabel Ormocarpum somalense: 132209 deleted in favor of 9273 +study 887: taxonlabel Pictetia sulcata: 132199 deleted in favor of 828 +study 887: taxonlabel Ormocarpum orientale: 132250 deleted in favor of 816 +study 887: taxonlabel Ormocarpum trichocarpum: 132201 deleted in favor of 786 +study 887: taxonlabel Diphysa racemosa: 132228 deleted in favor of 9263 +study 887: taxonlabel Pictetia mucronata: 132163 deleted in favor of 803 +study 887: taxonlabel Ormocarpum megalophyllum: 132191 deleted in favor of 821 +study 887: taxonlabel Chapmannia reghidensis: 132180 deleted in favor of 9269 +study 887: taxonlabel Chapmannia somalensis: 132216 deleted in favor of 9280 +study 887: taxonlabel Pictetia nipensis: 132151 deleted in favor of 785 +study 887: taxonlabel Pictetia marginata1: 132152 deleted in favor of 9258 +study 887: taxonlabel Diphysa spinosa: 132224 deleted in favor of 9257 +study 887: taxonlabel Ormocarpum flavum: 132202 deleted in favor of 798 +study 887: taxonlabel Ormocarpum muricatum: 132205 deleted in favor of 9235 +study 887: taxonlabel Diphysa spinosa1: 132149 deleted in favor of 9259 +study 887: taxonlabel Arachis magna: 132229 deleted in favor of 9279 +study 887: taxonlabel Ormocarpum dhofarense: 132211 deleted in favor of 9243 +study 887: taxonlabel Arachis batizocoi: 132185 deleted in favor of 9252 +study 887: taxonlabel Diphysa suberosa1: 132231 deleted in favor of 9245 +study 887: taxonlabel Ormocarpum drakei1: 132196 deleted in favor of 9271 +study 887: taxonlabel Diphysa thurberi: 132175 deleted in favor of 788 +study 887: taxonlabel Ormocarpum kirkii1: 132245 deleted in favor of 9241 +study 887: taxonlabel Stylosanthes guianensis: 132219 deleted in favor of 9253 +study 887: taxonlabel Arachis hermannii: 132241 deleted in favor of 9250 +study 887: taxonlabel Diphysa racemosa1: 132204 deleted in favor of 9265 +study 887: taxonlabel Diphysa americana2: 132203 deleted in favor of 9260 +study 887: taxonlabel Chapmannia tinireana: 132188 deleted in favor of 9248 +study 887: taxonlabel Ormocarpopsis tulearensis: 132162 deleted in favor of 801 +study 887: taxonlabel Arachis palustris: 132249 deleted in favor of 9270 +study 887: taxonlabel Pictetia aculeata1: 132181 deleted in favor of 9249 +study 887: taxonlabel Diphysa ormocarpoides1: 132253 deleted in favor of 9277 +study 887: taxonlabel Ormocarpum sennoides: 132254 deleted in favor of 824 +study 887: taxonlabel Ormocarpum verrucosum: 132234 deleted in favor of 799 +study 887: taxonlabel Diphysa americana1: 132244 deleted in favor of 9244 +study 887: taxonlabel Ormocarpum kirkii2: 132230 deleted in favor of 9242 +study 887: taxonlabel Dalbergia sissoo1: 132176 deleted in favor of 9275 +study 887: taxonlabel Arachis correntina: 132192 deleted in favor of 9264 +study 887: taxonlabel Pictetia obcordata: 132240 deleted in favor of 784 +study 887: taxonlabel Machaerium inundatum: 132171 deleted in favor of 9246 +study 887: taxonlabel Ormocarpum pubescens: 132154 deleted in favor of 825 +study 887: taxonlabel Diphysa suberosa: 132233 deleted in favor of 9240 +study 887: taxonlabel Ormocarpum bernierianum1: 132242 deleted in favor of 9262 +study 887: taxonlabel Ormocarpopsis mandrarensis: 132168 deleted in favor of 780 +study 887: taxonlabel Pictetia mucronata1: 132164 deleted in favor of 9239 +study 887: taxonlabel Ormocarpopsis aspera: 132212 deleted in favor of 820 +study 887: taxonlabel Ormocarpum drakei: 132167 deleted in favor of 9255 +study 887: taxonlabel Adesmia volckmannii1: 132232 deleted in favor of 9247 +study 887: taxonlabel Ormocarpum gillettii: 132195 deleted in favor of 9251 +study 887: taxonlabel Ormocarpum gillettii1: 132200 deleted in favor of 9274 +study 887: taxonlabel Pictetia spinosa: 132189 deleted in favor of 797 +study 887: taxonlabel Ormocarpopsis parvifolia1: 132193 deleted in favor of 9256 +study 887: taxonlabel Diphysa sennoides: 132220 deleted in favor of 818 +study 887: taxonlabel Ormocarpopsis parvifolia: 132252 deleted in favor of 9261 +study 887: taxonlabel Arachis villosa: 132165 deleted in favor of 9276 +study 887: taxonlabel Ormocarpum trachycarpum: 132182 deleted in favor of 795 +study 887: taxonlabel Arachis triseminata: 132227 deleted in favor of 9077 +study 887: taxonlabel Diphysa macrophylla: 132225 deleted in favor of 792 +study 2024: taxonlabel Neotyphodium sp 1081Bpu: 210432 deleted in favor of 77929 +study 2024: taxonlabel Epichloe typhina 200736Lp: 210462 deleted in favor of 77932 +study 2024: taxonlabel Neotyphodium sp 4078LaA: 210427 deleted in favor of 77939 +study 2024: taxonlabel Brachyelytrum erectum: 210437 deleted in favor of 77968 +study 2024: taxonlabel Epichloe amarillans 200743So: 210454 deleted in favor of 77947 +study 2024: taxonlabel Agrostis tenuis: 210416 deleted in favor of 77966 +study 2024: taxonlabel Epichloe bromicola 201558Br: 210426 deleted in favor of 77928 +study 2024: taxonlabel Hordelymus europaeus: 210428 deleted in favor of 77958 +study 2024: taxonlabel Lolium sp P4074: 210413 deleted in favor of 77955 +study 2024: taxonlabel Lolium perenne2: 210442 deleted in favor of 77964 +study 2024: taxonlabel Neotyphodium canariense 989Lc: 210460 deleted in favor of 77948 +study 2024: taxonlabel Glyceria striata: 210443 deleted in favor of 8396 +study 2024: taxonlabel Lolium multiflorum: 210419 deleted in favor of 8410 +study 2024: taxonlabel Epichloe elymi 201551Ec: 210420 deleted in favor of 77944 +study 2024: taxonlabel Calamagrostis villosa: 210418 deleted in favor of 77961 +study 2024: taxonlabel Epichloe festucae 1157Kc: 210423 deleted in favor of 77941 +study 2024: taxonlabel Epichloe festucae 90660Frc: 210436 deleted in favor of 77931 +study 2024: taxonlabel Lolium perenne: 210446 deleted in favor of 13032 +study 2024: taxonlabel Neotyphodium lolii: 210453 deleted in favor of 38665 +study 2024: taxonlabel Bromus purgans: 210431 deleted in favor of 77953 +study 2024: taxonlabel Echinopogon ovatus: 210457 deleted in favor of 77963 +study 2024: taxonlabel Epichloe baconii 200745Cv: 210412 deleted in favor of 77934 +study 2024: taxonlabel Agrostis hiemalis: 210458 deleted in favor of 77967 +study 2024: taxonlabel Bromus erectus: 210444 deleted in favor of 5777 +study 2024: taxonlabel Epichloe bromicola 200749Be: 210461 deleted in favor of 77951 +study 2024: taxonlabel Neotyphodium sp 3635Hbr: 210459 deleted in favor of 77936 +study 2024: taxonlabel Epichloe festucae 28Fl: 210439 deleted in favor of 77949 +study 2024: taxonlabel Neotyphodium gansuense 818Ai: 210415 deleted in favor of 77935 +study 2024: taxonlabel Epichloe glyceriae 200755Gs: 210414 deleted in favor of 77945 +study 2024: taxonlabel Sphenopholis obtusata: 210441 deleted in favor of 77965 +study 2024: taxonlabel Neotyphodium aotearoae 829: 210411 deleted in favor of 77950 +study 2024: taxonlabel Achnatherum inebrians: 210421 deleted in favor of 77957 +study 2024: taxonlabel Bromus ramosus: 210455 deleted in favor of 5795 +study 2024: taxonlabel Lolium sp P4078: 210447 deleted in favor of 77969 +study 2024: taxonlabel Brachypodum sylvaticum: 210430 deleted in favor of 77956 +study 2024: taxonlabel Hordeum brevisublulatum: 210429 deleted in favor of 77970 +study 2024: taxonlabel Neotyphodium occultans 999Lm: 210452 deleted in favor of 77943 +study 2024: taxonlabel Festuca rubra: 210451 deleted in favor of 13044 +study 2024: taxonlabel Koeleria cristata: 210433 deleted in favor of 77952 +study 2024: taxonlabel Lolium arundinaceum: 210425 deleted in favor of 77962 +study 2024: taxonlabel Epichloe baconii 200746At: 210434 deleted in favor of 77946 +study 2024: taxonlabel Epichloe sylvatica 200751Bs: 210445 deleted in favor of 77930 +study 2024: taxonlabel Neotyphodium sp 4074LaT: 210440 deleted in favor of 77942 +study 2024: taxonlabel Holcus mollis: 210417 deleted in favor of 77960 +study 2024: taxonlabel Epichloe amarillans 200744Ah: 210448 deleted in favor of 77937 +study 2024: taxonlabel Epichloe brachyelytri: 210422 deleted in favor of 67495 +study 2024: taxonlabel Elymus canadensis: 210438 deleted in favor of 59186 +study 2024: taxonlabel Neotyphodium sp 362Heur: 210424 deleted in favor of 77938 +study 2024: taxonlabel Neotyphodium coenopialum 19T: 210435 deleted in favor of 77933 +study 2024: taxonlabel Epichloe sp 9924Hm: 210456 deleted in favor of 77940 +study 2024: taxonlabel Lolium edwardii: 210449 deleted in favor of 77959 +study 2024: taxonlabel Festuca longifolia: 210450 deleted in favor of 77954 +study 802: taxonlabel Pirodrilus minutus: 126519 deleted in favor of 4503 +study 802: taxonlabel Tubifex smirnowi: 126513 deleted in favor of 4481 +study 802: taxonlabel Limnodriloides barnardi: 126543 deleted in favor of 4498 +study 802: taxonlabel Bathydrilus formosus: 126526 deleted in favor of 4460 +study 802: taxonlabel Bothrioneurum vejdovskyanum: 126555 deleted in favor of 4463 +study 802: taxonlabel Limnodriloides monothecus: 126552 deleted in favor of 4478 +study 802: taxonlabel Heterodrilus queenslandicus: 126545 deleted in favor of 4455 +study 802: taxonlabel Heterodrilus paucifascis: 126537 deleted in favor of 4458 +study 802: taxonlabel Limnodriloides lateroporus: 126540 deleted in favor of 4444 +study 802: taxonlabel Heterodrilus minisetosus: 126517 deleted in favor of 4487 +study 802: taxonlabel Enchytraeus sp: 126525 deleted in favor of 4497 +study 802: taxonlabel Monopylephorus rubroniveus: 126546 deleted in favor of 4470 +study 802: taxonlabel Slavina appendiculata: 126548 deleted in favor of 4447 +study 802: taxonlabel Limnodriloides baculatus: 126549 deleted in favor of 4492 +study 802: taxonlabel Limnodrilus hoffmeisteri: 126531 deleted in favor of 4507 +study 802: taxonlabel Limnodriloides vespertinus: 126518 deleted in favor of 4453 +study 802: taxonlabel Thalassodrilides bruneti: 126556 deleted in favor of 4484 +study 802: taxonlabel Limnodriloides anxius: 126534 deleted in favor of 4445 +study 802: taxonlabel Chaetogaster diastrophus: 126520 deleted in favor of 4474 +study 802: taxonlabel Ainudrilus lutulentus: 126533 deleted in favor of 4462 +study 802: taxonlabel Tectidrilus verrucosus: 126512 deleted in favor of 4466 +study 802: taxonlabel Pristina longiseta: 126561 deleted in favor of 4469 +study 802: taxonlabel Olavius tantulus: 126544 deleted in favor of 4473 +study 802: taxonlabel Inanidrilus leukodermatus: 126532 deleted in favor of 4479 +study 802: taxonlabel Ainudrilus geminus: 126521 deleted in favor of 4499 +study 802: taxonlabel Olavius albidus: 126539 deleted in favor of 4495 +study 802: taxonlabel Olavius vacuus: 126562 deleted in favor of 4450 +study 802: taxonlabel Stylodrilus heringianus: 126502 deleted in favor of 4456 +study 802: taxonlabel Inanidrilus triangulatus: 126504 deleted in favor of 4446 +study 802: taxonlabel Limnodriloides armatus: 126554 deleted in favor of 4493 +study 802: taxonlabel Heterodrilus jamiesoni: 126505 deleted in favor of 4459 +study 802: taxonlabel Pectinodrilus molestus: 126558 deleted in favor of 4476 +study 802: taxonlabel Tubificoides parviductus: 126563 deleted in favor of 4505 +study 802: taxonlabel Buchholzia fallax: 126564 deleted in favor of 4465 +study 802: taxonlabel Tubificoides pseudogaster: 126514 deleted in favor of 4452 +study 802: taxonlabel Vejdovskyella comata: 126516 deleted in favor of 4488 +study 802: taxonlabel Tectidrilus bori: 126530 deleted in favor of 4477 +study 802: taxonlabel Olavius algarvensis: 126559 deleted in favor of 4485 +study 802: taxonlabel Heronidrilus heronae: 126501 deleted in favor of 4506 +study 802: taxonlabel Clitellio arenarius: 126541 deleted in favor of 4467 +study 802: taxonlabel Tubifex ignotus: 126507 deleted in favor of 4494 +study 802: taxonlabel Bathydrilus litoreus: 126523 deleted in favor of 4500 +study 802: taxonlabel Nais communis: 126542 deleted in favor of 4472 +study 802: taxonlabel Tubificoides benedii: 126529 deleted in favor of 4483 +study 802: taxonlabel Aktedrilus arcticus: 126547 deleted in favor of 4454 +study 802: taxonlabel Heterodrilus decipiens: 126553 deleted in favor of 4504 +study 802: taxonlabel Smithsonidrilus westoni: 126560 deleted in favor of 4468 +study 802: taxonlabel Thalassodrilides ineri: 126515 deleted in favor of 4508 +study 802: taxonlabel Bathydrilus adriaticus: 126538 deleted in favor of 4486 +study 802: taxonlabel Paranais litoralis: 126527 deleted in favor of 4496 +study 802: taxonlabel Inanidrilus aduncosetis: 126509 deleted in favor of 4490 +study 802: taxonlabel Smithsonidrilus hummelincki: 126535 deleted in favor of 4475 +study 802: taxonlabel Lumbricus castaneus: 126503 deleted in favor of 4471 +study 802: taxonlabel Insulodrilus bifidus: 126551 deleted in favor of 4482 +study 802: taxonlabel Limnodriloides rubicundus: 126550 deleted in favor of 4443 +study 802: taxonlabel Heterodrilus flexuosus: 126506 deleted in favor of 4502 +study 802: taxonlabel Thalassodrilides gurwitschi: 126528 deleted in favor of 4442 +study 802: taxonlabel Limnodrilus udekemianus: 126500 deleted in favor of 4491 +study 802: taxonlabel Limnodriloides appendiculatus: 126508 deleted in favor of 4457 +study 802: taxonlabel Bathydrilus rohdei: 126524 deleted in favor of 4501 +study 802: taxonlabel Doliodrilus tener: 126511 deleted in favor of 4449 +study 1513: taxonlabel Begonia symsanguinea: 170247 deleted in favor of 29810 +study 1513: taxonlabel Begonia versicolor: 170241 deleted in favor of 29844 +study 1513: taxonlabel Begonia variabilis: 170269 deleted in favor of 29822 +study 1513: taxonlabel Begonia leprosa: 170272 deleted in favor of 29811 +study 1513: taxonlabel Begonia hernandioides: 170276 deleted in favor of 29830 +study 1513: taxonlabel Begonia hemsleyana: 170275 deleted in favor of 29812 +study 1513: taxonlabel Begonia rajah: 170268 deleted in favor of 29849 +study 1513: taxonlabel Begonia dregei: 170271 deleted in favor of 17872 +study 1513: taxonlabel Begonia acetosella acetosella: 170258 deleted in favor of 29804 +study 1513: taxonlabel Begonia longifolia China: 170256 deleted in favor of 29801 +study 1513: taxonlabel Begonia xanthiana: 170254 deleted in favor of 29814 +study 1513: taxonlabel Begonia halconensis: 170226 deleted in favor of 29840 +study 1513: taxonlabel Begonia silletensis: 170231 deleted in favor of 29829 +study 1513: taxonlabel Begonia sp nov Sulawesi 254: 170229 deleted in favor of 29816 +study 1513: taxonlabel Begonia handelii prostrata: 170242 deleted in favor of 29836 +study 1513: taxonlabel Begonia chloroneura: 170225 deleted in favor of 29821 +study 1513: taxonlabel Begonia masoniana: 170232 deleted in favor of 17865 +study 1513: taxonlabel Begonia longifolia AY044980: 170234 deleted in favor of 29825 +study 1513: taxonlabel Begonia ceratocarpa: 170267 deleted in favor of 29827 +study 1513: taxonlabel Begonia cathayana: 170228 deleted in favor of 29826 +study 1513: taxonlabel Begonia kingiana: 170243 deleted in favor of 29831 +study 1513: taxonlabel Begonia morsei: 170263 deleted in favor of 29819 +study 1513: taxonlabel Begonia hayatae: 170236 deleted in favor of 29808 +study 1513: taxonlabel Begonia circumlobata: 170257 deleted in favor of 29817 +study 1513: taxonlabel Begonia cristata: 170259 deleted in favor of 29845 +study 1513: taxonlabel Begonia goegoensis: 170253 deleted in favor of 29828 +study 1513: taxonlabel Begonia taiwaniana: 170262 deleted in favor of 29832 +study 1513: taxonlabel Begonia longifolia Java: 170261 deleted in favor of 29843 +study 1513: taxonlabel Begonia labordei: 170230 deleted in favor of 29837 +study 1513: taxonlabel Begonia brevirimosa: 170246 deleted in favor of 29807 +study 1513: taxonlabel Begonia rubella: 170260 deleted in favor of 29824 +study 1513: taxonlabel Begonia amphioxis: 170233 deleted in favor of 29848 +study 1513: taxonlabel Begonia diadema: 170265 deleted in favor of 29809 +study 1513: taxonlabel Begonia oxysperma: 170250 deleted in favor of 29835 +study 1513: taxonlabel Begonia balansana: 170240 deleted in favor of 29805 +study 1513: taxonlabel Begonia multangula: 170252 deleted in favor of 29820 +study 1513: taxonlabel Begonia longicarpa: 170237 deleted in favor of 29846 +study 1513: taxonlabel Begonia rex: 170245 deleted in favor of 29803 +study 1513: taxonlabel Begonia pavonina: 170266 deleted in favor of 29841 +study 1513: taxonlabel Begonia roxburghii Female: 170251 deleted in favor of 29842 +study 1513: taxonlabel Begonia alveolata: 170238 deleted in favor of 29839 +study 1513: taxonlabel Begonia robusta: 170270 deleted in favor of 29838 +study 1513: taxonlabel Begonia chlorosticta: 170239 deleted in favor of 29818 +study 1513: taxonlabel Begonia roxburghii Male: 170244 deleted in favor of 29834 +study 1513: taxonlabel Begonia palmata: 170227 deleted in favor of 17870 +study 1513: taxonlabel Begonia malachosticta: 170255 deleted in favor of 29802 +study 1513: taxonlabel Begonia alpina: 170249 deleted in favor of 29823 +study 1513: taxonlabel Begonia muricata: 170235 deleted in favor of 29806 +study 1513: taxonlabel Begonia wenshanensis: 170264 deleted in favor of 29833 +study 1513: taxonlabel Begonia geranioides: 170273 deleted in favor of 29813 +study 1513: taxonlabel Begonia handelii handelii: 170274 deleted in favor of 29815 +study 1513: taxonlabel Begonia boisiana: 170248 deleted in favor of 29847 +study 1070: taxonlabel Phanacis 1: 141045 deleted in favor of 2408 +study 1070: taxonlabel Liposthenes gle: 141031 deleted in favor of 2391 +study 1070: taxonlabel Parnips: 141046 deleted in favor of 2398 +study 1070: taxonlabel Liposthenes ker: 141039 deleted in favor of 2395 +study 1070: taxonlabel Phanacis 2: 141027 deleted in favor of 2404 +study 1070: taxonlabel Aulacidea: 141024 deleted in favor of 2387 +study 1350: taxonlabel Erysiphe pulchra var. japonica: 159102 deleted in favor of 37503 +study 1350: taxonlabel Oidium hevea MUMH2418 Brazil: 159088 deleted in favor of 37462 +study 1350: taxonlabel Erysiphe sinensis: 159099 deleted in favor of 37480 +study 1350: taxonlabel Erysiphe trifolii var. trifolii: 159069 deleted in favor of 8777 +study 1350: taxonlabel Oidium hevea MUMH2602 Thailand: 159100 deleted in favor of 37452 +study 1350: taxonlabel Erysiphe sparsa: 159084 deleted in favor of 37490 +study 1350: taxonlabel Erysiphe sp. MUMH124 Japan: 159072 deleted in favor of 37457 +study 1350: taxonlabel Oidium sp. AF154328: 159086 deleted in favor of 37491 +study 1350: taxonlabel Oidium hevea MUMH2545 Malaysia: 159066 deleted in favor of 37482 +study 1350: taxonlabel Erysiphe pulchra var. japonica AB0009: 159078 deleted in favor of 37476 +study 1350: taxonlabel Oidium hevea MUMH2544 Malaysia: 159053 deleted in favor of 37495 +study 1350: taxonlabel Oidium sp. AB078800: 159075 deleted in favor of 37455 +study 1350: taxonlabel Erysiphe pulchra var. japonica AB0159: 159077 deleted in favor of 37464 +study 1350: taxonlabel Erysiphe friesii var. dahurica: 159057 deleted in favor of 37469 +study 1350: taxonlabel Oidium hevea MUMH2419 Brazil: 159091 deleted in favor of 37461 +study 1080: taxonlabel Synechococcus WH8103: 141623 deleted in favor of 18357 +study 1080: taxonlabel Synechococcus KU43Fr from Chondrilla nucula: 141620 deleted in favor of 18359 +study 1080: taxonlabel Synechococcus NACL5: 141619 deleted in favor of 18358 +study 1080: taxonlabel Prochlorococcus NATL2: 141624 deleted in favor of 18355 +study 1080: taxonlabel Synechococcus from Petrosia ficiformis: 141622 deleted in favor of 18354 +study 1080: taxonlabel Oscillatoria rosea: 141621 deleted in favor of 18356 +study 1209: taxonlabel Capnodium dermatum: 149503 deleted in favor of 3543 +study 1209: taxonlabel Chaetasbolisia falcata: 149522 deleted in favor of 3544 +study 1209: taxonlabel Dothiora rhamni alpinae: 149543 deleted in favor of 18384 +study 1209: taxonlabel Hormonema prunorum: 149534 deleted in favor of 18388 +study 1209: taxonlabel Phaeosclera dematioides: 149526 deleted in favor of 3554 +study 1209: taxonlabel Sarcinomyces crustaceus: 149508 deleted in favor of 3556 +study 1209: taxonlabel Capnobotryella renispora AY220611: 149533 deleted in favor of 3557 +study 1209: taxonlabel Endoconidioma populi UAMH 10297: 149549 deleted in favor of 61632 +study 1209: taxonlabel Kabatiella lini: 149523 deleted in favor of 18387 +study 1209: taxonlabel Aureobasidium pullulans AF013229: 149491 deleted in favor of 18390 +study 1209: taxonlabel Phaeocryptopus gaeumanii: 149550 deleted in favor of 18379 +study 1209: taxonlabel Dothiora europaea: 149504 deleted in favor of 18396 +study 1209: taxonlabel Kabatina juniperi AF182376: 149495 deleted in favor of 18385 +study 1209: taxonlabel Aureobasidium pullulans AF121287: 149551 deleted in favor of 18378 +study 1209: taxonlabel Antennariella californica: 149513 deleted in favor of 3555 +study 1209: taxonlabel Endoconidioma populi: 149515 deleted in favor of 3550 +study 1209: taxonlabel Hormonema sp ATCC74360: 149545 deleted in favor of 61633 +study 1209: taxonlabel Capnobotryella renispora AY220614: 149542 deleted in favor of 3534 +study 1209: taxonlabel Rhizosphaera pini: 149521 deleted in favor of 18394 +study 1209: taxonlabel Endoconidioma populi UAMH 10298: 149509 deleted in favor of 61631 +study 1209: taxonlabel Capnobotryella sp. nov AJ301706: 149520 deleted in favor of 3553 +study 1209: taxonlabel Hyphospora agavaciensis: 149535 deleted in favor of 3539 +study 1209: taxonlabel Aureobasidium pullulans AJ276062: 149512 deleted in favor of 18383 +study 1209: taxonlabel Rhizosphaera macrospora: 149517 deleted in favor of 18395 +study 1209: taxonlabel Rhizosphaera oudemansii: 149546 deleted in favor of 18393 +study 2125: taxonlabel Diplodia mutila: 219214 deleted in favor of 91946 +study 2125: taxonlabel Diplodia medicaginis CBS500.72: 219254 deleted in favor of 91903 +study 2125: taxonlabel Pseudofusicoccum stromaticum CBS117448: 219211 deleted in favor of 91884 +study 2125: taxonlabel Dothiorella iberica CBS115041: 219238 deleted in favor of 91889 +study 2125: taxonlabel Diplodia mutila CBS112553: 219282 deleted in favor of 46070 +study 2125: taxonlabel Diplodia corticola CBS112549: 219279 deleted in favor of 46047 +study 2125: taxonlabel Diplodia mutila CBS230.30: 219304 deleted in favor of 46079 +study 2125: taxonlabel Botryosphaeria tsugae CBS418.64: 219221 deleted in favor of 91906 +study 2125: taxonlabel Lasiodiplodia theobromae: 219236 deleted in favor of 67078 +study 2125: taxonlabel Phaeobotryosphaeria citrigena ICMP16812: 219274 deleted in favor of 91885 +study 2125: taxonlabel Dothiorella JL599: 219290 deleted in favor of 91940 +study 2125: taxonlabel Neofusicoccum ribis: 219213 deleted in favor of 23095 +study 2125: taxonlabel Lasiodiplodia venezuelensis CBS118739: 219298 deleted in favor of 91913 +study 2125: taxonlabel Diplodia cupressi CBS261.85: 219227 deleted in favor of 46068 +study 2125: taxonlabel Phaeobotryon mamane CPC12445: 219301 deleted in favor of 91934 +study 2125: taxonlabel Botryosphaeria dothidea CBS110302: 219295 deleted in favor of 28971 +study 2125: taxonlabel Neodeightonia phoenicum CBS169.34: 219228 deleted in favor of 91893 +study 2125: taxonlabel Diplodia acerina CBS910.73: 219265 deleted in favor of 91938 +study 2125: taxonlabel Neofusicoccum luteum CBS110497: 219223 deleted in favor of 91924 +study 2125: taxonlabel Spencermartinsia viticola CBS117009: 219207 deleted in favor of 91888 +study 2125: taxonlabel Dothidotthia symphoricarpi CPC12929: 219216 deleted in favor of 91945 +study 2125: taxonlabel Diplodia pinea C CBS109943: 219315 deleted in favor of 46066 +study 2125: taxonlabel Neofusicoccum parvum CBS110301: 219232 deleted in favor of 91914 +study 2125: taxonlabel Phaeobotryosphaeria citrigena ICMP16818: 219261 deleted in favor of 91939 +study 2125: taxonlabel Pseudofusicoccum stromaticum CBS117449: 219291 deleted in favor of 91905 +study 2125: taxonlabel Lasiodiplodia theobromae CBS124.13: 219273 deleted in favor of 91918 +study 2125: taxonlabel Phaeobotryon mamane CPC12443: 219250 deleted in favor of 91932 +study 2125: taxonlabel Dothiorella sarmentorum: 219235 deleted in favor of 91941 +study 2125: taxonlabel Diplodia cupressi CBS168.87: 219243 deleted in favor of 46072 +study 2125: taxonlabel Barriopsis fusca CBS174.26: 219287 deleted in favor of 91907 +study 2125: taxonlabel Spencermartinsia ICMP16827: 219313 deleted in favor of 91917 +study 2125: taxonlabel Dothidotthia CPC12933: 219225 deleted in favor of 91943 +study 2125: taxonlabel Neofusicoccum mangiferum CBS118531: 219286 deleted in favor of 91897 +study 2125: taxonlabel Botryosphaeria corticis CBS119047: 219258 deleted in favor of 28975 +study 2125: taxonlabel Piedraia hortae: 219210 deleted in favor of 49808 +study 2125: taxonlabel Lasiodiplodia theobromae CBS164.96: 219310 deleted in favor of 91920 +study 2125: taxonlabel Diplodia rosulata CBS116472: 219257 deleted in favor of 91902 +study 2125: taxonlabel Dothiorella sarmentorum CBS115038: 219240 deleted in favor of 91925 +study 2125: taxonlabel Dothiorella iberica CBS113188: 219249 deleted in favor of 91936 +study 2125: taxonlabel Spencermartinsia ICMP16819: 219283 deleted in favor of 91896 +study 2125: taxonlabel Diplodia pinea C CBS109725: 219260 deleted in favor of 46069 +study 2125: taxonlabel Lasiodiplodia theobromae CAA006: 219288 deleted in favor of 91894 +study 2125: taxonlabel Diplodia scrobiculata CBS113423: 219266 deleted in favor of 90115 +study 2125: taxonlabel Botryosphaeria dothidea CBS115476: 219233 deleted in favor of 91908 +study 2125: taxonlabel Hysteropatella clavispora: 219318 deleted in favor of 13248 +study 2125: taxonlabel Dothidotthia CPC12928: 219259 deleted in favor of 91950 +study 2125: taxonlabel Dothiorella sarmentorum IMI63581b: 219319 deleted in favor of 91923 +study 2125: taxonlabel Diplodia coryli CBS242.51: 219305 deleted in favor of 91916 +study 2125: taxonlabel Dothidotthia CPC12932: 219217 deleted in favor of 91948 +study 2125: taxonlabel Lasiodiplodia rubropurpurea CBS118740: 219263 deleted in favor of 91900 +study 2125: taxonlabel Lasiodiplodia crassispora CBS118741: 219299 deleted in favor of 91887 +study 2125: taxonlabel Diplodia scrobiculata CBS109944: 219220 deleted in favor of 46056 +study 2125: taxonlabel Didymella cucurbitacearum: 219251 deleted in favor of 49774 +study 2125: taxonlabel Phaeobotryosphaeria visci CBS186.97: 219234 deleted in favor of 91892 +study 2125: taxonlabel Neofusicoccum luteum CBS110299: 219226 deleted in favor of 91927 +study 2125: taxonlabel Diplodia juglandis CBS188.87: 219268 deleted in favor of 91895 +study 2125: taxonlabel Neodeightonia subglobosa CBS448.91: 219272 deleted in favor of 91909 +study 2125: taxonlabel Neofusicoccum mangiferum CBS118532: 219222 deleted in favor of 91904 +study 2125: taxonlabel Phaeobotryon mamane CPC12264: 219280 deleted in favor of 91915 +study 2125: taxonlabel Dothidotthia CPC12930: 219292 deleted in favor of 91947 +study 2125: taxonlabel Spencermartinsia ICMP16828: 219244 deleted in favor of 91901 +study 2125: taxonlabel Neodeightonia phoenicum CBS122528: 219311 deleted in favor of 91937 +study 2125: taxonlabel Phaeobotryosphaeria porosum CBS110496: 219229 deleted in favor of 91910 +study 2125: taxonlabel Diplodia spegazziniana CBS302.75: 219317 deleted in favor of 91921 +study 2125: taxonlabel Phaeobotryosphaeria visci CBS100163: 219293 deleted in favor of 91886 +study 2125: taxonlabel Lasiodiplodia pseudotheobromae CBS116459: 219253 deleted in favor of 91935 +study 2125: taxonlabel Lasiodiplodia gonubiensis CBS115812: 219241 deleted in favor of 91926 +study 2125: taxonlabel Diplodia pinea A CBS109727: 219276 deleted in favor of 46054 +study 2125: taxonlabel Spencermartinsia ICMP16824: 219231 deleted in favor of 91919 +study 2125: taxonlabel Diplodia seriata CBS119049: 219303 deleted in favor of 46062 +study 2125: taxonlabel Lasiodiplodia crassispora CBS110492: 219277 deleted in favor of 91933 +study 2125: taxonlabel Spencermartinsia viticola CBS117006: 219289 deleted in favor of 91929 +study 2125: taxonlabel Massarina arundinacea: 219294 deleted in favor of 91949 +study 2125: taxonlabel Diplodia corticola CBS112546: 219215 deleted in favor of 91930 +study 2125: taxonlabel Phaeobotryon mamane CPC12444: 219264 deleted in favor of 91931 +study 2125: taxonlabel Dothiorella CAP187: 219206 deleted in favor of 91890 +study 2125: taxonlabel Neodeightonia phoenicum JL515: 219297 deleted in favor of 91898 +study 2125: taxonlabel Diplodia pinea A CBS393.84: 219284 deleted in favor of 46078 +study 2125: taxonlabel Diplodia rosulata CBS116470: 219208 deleted in favor of 91891 +study 2125: taxonlabel Phaeobotryon mamane CPC12442: 219271 deleted in favor of 91922 +study 2125: taxonlabel Lewia eureka: 219246 deleted in favor of 91944 +study 2125: taxonlabel Lasiodiplodia gonubiensis CBS116355: 219302 deleted in favor of 91928 +study 2125: taxonlabel Phaeobotryon mamane CPC12440: 219270 deleted in favor of 91912 +study 2125: taxonlabel Lasiodiplodia parva CBS356.59: 219307 deleted in favor of 91899 +study 2125: taxonlabel Diplodia seriata CBS112555: 219267 deleted in favor of 46088 +study 2125: taxonlabel Dothiorella CAA005: 219306 deleted in favor of 91911 +study 1420: taxonlabel Vaccinium uliginosum F WGre V53a: 163142 deleted in favor of 40229 +study 1420: taxonlabel Vaccinium uliginosum C NNor V17a: 163148 deleted in favor of 40234 +study 1420: taxonlabel Vaccinium uliginosum L Cali V47a: 163136 deleted in favor of 40227 +study 1420: taxonlabel Vaccinium uliginosum K Icel V11a: 163143 deleted in favor of 40222 +study 1420: taxonlabel Vaccinium uliginosum P USA V78: 163135 deleted in favor of 40226 +study 1420: taxonlabel Vaccinium uliginosum N Russ V115: 163137 deleted in favor of 40232 +study 1420: taxonlabel Vaccinium uliginosum M Alas V85: 163141 deleted in favor of 40238 +study 1420: taxonlabel Vaccinium uliginosum J Chuk V43a: 163152 deleted in favor of 40220 +study 1420: taxonlabel Vaccinium vitis-idaea: 163150 deleted in favor of 40224 +study 1420: taxonlabel Vaccinium uliginosum I Cana V48a: 163138 deleted in favor of 40223 +study 1420: taxonlabel Vaccinium uliginosum G Cana V52a: 163147 deleted in favor of 40221 +study 1420: taxonlabel Vaccinium uliginosum B Pyre V67a: 163149 deleted in favor of 40231 +study 1420: taxonlabel Vaccinium uliginosum A Alps V30a: 163145 deleted in favor of 40219 +study 1420: taxonlabel Vaccinium uliginosum O Alas V150: 163154 deleted in favor of 40235 +study 1420: taxonlabel Vaccinium uliginosum D Alps V31b: 163151 deleted in favor of 40233 +study 1420: taxonlabel Vaccinium uliginosum E Cana V50a: 163140 deleted in favor of 40230 +study 1420: taxonlabel Vaccinium myrtillus: 163144 deleted in favor of 40237 +study 1420: taxonlabel Vaccinium uliginosum R Alas V84: 163153 deleted in favor of 40228 +study 1420: taxonlabel Vaccinium uliginosum H Russ V39a: 163139 deleted in favor of 40236 +study 1420: taxonlabel Vaccinium uliginosum Q Alas V152c vulc: 163146 deleted in favor of 40225 +study 630: taxonlabel Saranga: 106628 deleted in favor of 64586 +study 1087: taxonlabel Botryosphaeria proteae AF452561: 142029 deleted in favor of 18576 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5032: 141945 deleted in favor of 18607 +study 1087: taxonlabel Botryosphaeria protearum AF452538: 142025 deleted in favor of 18667 +study 1087: taxonlabel Botryosphaeria rhodina AF243401: 142021 deleted in favor of 18562 +study 1087: taxonlabel Diplodia sp. STE-U 5148: 142053 deleted in favor of 18652 +study 1087: taxonlabel Botryosphaeria australis STE-U 5054: 142000 deleted in favor of 18592 +study 1087: taxonlabel Botryosphaeria rhodina STE-U 4422: 141924 deleted in favor of 18618 +study 1087: taxonlabel Botryosphaeria australis STE-U 4430: 142031 deleted in favor of 18615 +study 1087: taxonlabel Cercospora penzigii STE-U 4001: 141974 deleted in favor of 18679 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4436: 142015 deleted in favor of 18581 +study 1087: taxonlabel Botryosphaeria australis AY339260: 142010 deleted in favor of 18646 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4542: 141981 deleted in favor of 18664 +study 1087: taxonlabel Botryosphaeria australis STE-U 4528: 141957 deleted in favor of 18551 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4588: 142059 deleted in favor of 18601 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4527: 141973 deleted in favor of 18627 +study 1087: taxonlabel Botryosphaeria protearum AF452528: 141930 deleted in favor of 18583 +study 1087: taxonlabel Botryosphaeria australis STE-U 4428: 141999 deleted in favor of 18658 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4532: 141949 deleted in favor of 18589 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4441: 141970 deleted in favor of 18653 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4443: 142033 deleted in favor of 18603 +study 1087: taxonlabel Botryosphaeria parva STE-U 4534: 141975 deleted in favor of 18549 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5129: 142055 deleted in favor of 18617 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5163: 141927 deleted in favor of 18677 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4546: 142020 deleted in favor of 18609 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5143: 141987 deleted in favor of 18621 +study 1087: taxonlabel Botryosphaeria australis STE-U 4426: 141986 deleted in favor of 18624 +study 1087: taxonlabel Botryosphaeria australis STE-U 4434: 142067 deleted in favor of 18548 +study 1087: taxonlabel Botryosphaeria australis STE-U 4432: 142004 deleted in favor of 18639 +study 1087: taxonlabel Botryosphaeria parva STE-U 4540: 141979 deleted in favor of 18610 +study 1087: taxonlabel Botryosphaeria parva STE-U 4584: 142022 deleted in favor of 18635 +study 1087: taxonlabel Otthia spiraeae IMI63581: 141936 deleted in favor of 18685 +study 1087: taxonlabel Botryosphaeria lutea AF027745: 142047 deleted in favor of 10271 +study 1087: taxonlabel Botryosphaeria parva STE-U 4438: 142060 deleted in favor of 18554 +study 1087: taxonlabel Botryosphaeria dothidea STE-U 5045: 141998 deleted in favor of 18619 +study 1087: taxonlabel Diplodia porosum STE-U 5132: 142026 deleted in favor of 18591 +study 1087: taxonlabel Diplodia porosum STE-U 5046: 141996 deleted in favor of 18550 +study 1087: taxonlabel Botryosphaeria australis STE-U 5039: 142054 deleted in favor of 18558 +study 1087: taxonlabel Botryosphaeria australis STE-U 4596: 141941 deleted in favor of 18611 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4539: 142002 deleted in favor of 18573 +study 1087: taxonlabel Botryosphaeria australis STE-U 4415: 142052 deleted in favor of 18642 +study 1087: taxonlabel Botryosphaeria rhodina STE-U 4423: 142023 deleted in favor of 18649 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5140: 142001 deleted in favor of 18565 +study 1087: taxonlabel Botryosphaeria ribis CMW7773 AY236936 and AY236877: 141932 deleted in favor of 18680 +study 1087: taxonlabel Botryosphaeria australis AY339261: 141983 deleted in favor of 18638 +study 1087: taxonlabel Botryosphaeria australis STE-U 4427: 142017 deleted in favor of 18632 +study 1087: taxonlabel Botryosphaeria dothidea STE-U 4595: 141935 deleted in favor of 18662 +study 1087: taxonlabel Botryosphaeria parva STE-U 5035: 142065 deleted in favor of 18659 +study 1087: taxonlabel Botryosphaeria rhodina STE-U 4419: 142064 deleted in favor of 18560 +study 1087: taxonlabel Botryosphaeria parva STE-U 4424: 141988 deleted in favor of 18640 +study 1087: taxonlabel Botryosphaeria stevensii AF243407: 141946 deleted in favor of 18612 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5053: 141965 deleted in favor of 18556 +study 1087: taxonlabel Botryosphaeria australis STE-U 4598: 141948 deleted in favor of 18557 +study 1087: taxonlabel Botryosphaeria lutea AF293480: 141954 deleted in favor of 10266 +study 1087: taxonlabel Botryosphaeria ribis CMW7772 AY236935: 141985 deleted in favor of 18574 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5043: 141959 deleted in favor of 18678 +study 1087: taxonlabel Diplodia sp. STE-U 5131: 142009 deleted in favor of 18650 +study 1087: taxonlabel Botryosphaeria lutea STE-U 4592: 141925 deleted in favor of 18569 +study 1087: taxonlabel Botryosphaeria parva CMW9079 AY236941 and AY236888: 141972 deleted in favor of 18681 +study 1087: taxonlabel Botryosphaeria australis STE-U 4435: 142041 deleted in favor of 18570 +study 1087: taxonlabel Botryosphaeria stevensii STE-U 5038: 141934 deleted in favor of 18645 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5161: 141961 deleted in favor of 18608 +study 1087: taxonlabel Botryosphaeria ribis CMW7773 AY236936: 142051 deleted in favor of 18668 +study 1087: taxonlabel Botryosphaeria rhodina STE-U 4583: 142003 deleted in favor of 18580 +study 1087: taxonlabel Diplodia sp. STE-U 5048: 142008 deleted in favor of 18604 +study 1087: taxonlabel Botryosphaeria lutea STE-U 4594: 141991 deleted in favor of 18598 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4541: 141933 deleted in favor of 18666 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4537: 141966 deleted in favor of 18631 +study 1087: taxonlabel Botryosphaeria parva CMW9079 AY236941: 142058 deleted in favor of 18567 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5141: 141955 deleted in favor of 18578 +study 1087: taxonlabel Botryosphaeria parva STE-U 4530: 142040 deleted in favor of 18600 +study 1087: taxonlabel Diplodia sp. STE-U 5146: 141995 deleted in favor of 18571 +study 1087: taxonlabel Botryosphaeria parva STE-U 4437: 141992 deleted in favor of 18553 +study 1087: taxonlabel Botryosphaeria parva STE-U 4431: 141962 deleted in favor of 18593 +study 1087: taxonlabel Botryosphaeria proteae AF452560: 141958 deleted in favor of 18660 +study 1087: taxonlabel Botryosphaeria australis STE-U 4535: 141968 deleted in favor of 18671 +study 1087: taxonlabel Botryosphaeria ribis AF027741: 141940 deleted in favor of 10230 +study 1087: taxonlabel Botryosphaeria rhodina STE-U 4421: 141950 deleted in favor of 18661 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 5162: 141963 deleted in favor of 18655 +study 1087: taxonlabel Botryosphaeria dothidea AF241175: 142043 deleted in favor of 10223 +study 1087: taxonlabel Botryosphaeria australis STE-U 4418: 142005 deleted in favor of 18575 +study 1087: taxonlabel Botryosphaeria obtusa STE-U 4440: 141994 deleted in favor of 18673 +study 1087: taxonlabel Botryosphaeria parva STE-U 4417: 142013 deleted in favor of 18625 +st... 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