From: Rutger V. <rut...@gm...> - 2009-12-17 09:37:02
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> The environment for this user should be setup from scratch instead of copied > over from an existing user's home dir. I need to be able to programatically > recreate this environment on the staging and production server, so I'll need > instructions on how to set everything up. I think those instructions > currently exist except for some mesquite issues. That's right, on the wiki I describe my user environment on treebase-dev.nescent.org. A fairly important part in this is played by a number of environment variables (https://sourceforge.net/apps/mediawiki/treebase/index.php?title=HostEnvironment), as you've noticed. If you prefer it's not done this way we may have to split these into variables to do with building and maintenance and variables to do with deployment (which would go into catalina.sh or tomcat5.conf). > On Dec 16, 2009, at 12:18 PM, Rutger Vos wrote: > >> http://treebasedb-dev.nescent.org:6666/treebase-web is up and running >> again, though the mesquite runtime issue is still not resolved. I >> fixed the compile time issue by putting the dependency on >> treebase-2.01.tb.jar back in the pom.xml (and committed this). >> >> I just got an email from Wayne suggesting a programmatic way to tell >> mesquite its location at runtime, I still have to try this. >> >> I am quite happy to "reconfigure" my account by sharing my login >> credentials with Youjun and Vladimir off-list (or is there a better >> way to do this)? >> >> I thought Youjun was capable locally of building and deploying the war >> (while talking to the remote db). I certainly can so I don't *have* to >> use the rv...@tr... account to get any work done. >> Vladimir, if you do an update on your end, will the source now build >> on your system? The complaints about mesquite.lib.* missing should go >> away. >> >> Rutger >> >> On Wed, Dec 16, 2009 at 5:07 PM, Hilmar Lapp <hl...@ne...> wrote: >>> >>> Rutger - >>> >>> it looks like at this point we do not have a second deployment-capable >>> installation on treebase-dev, and I get the sense that no one has one >>> local >>> to their lap/desktop either. >>> >>> Since Jon is on parental leave, can you reconfigure your account so that >>> it >>> can function as the shared developer account for now until Jon gets a >>> minute >>> to create that? >>> >>> Also, given that we want to do development work on the web-application in >>> parallel, I'd consider it high priority that we work out local >>> deployments >>> of the web-application on the developers' own machines. Vladimir seems to >>> be >>> almost there - what is missing right now? >>> >>> -hilmar >>> >>> On Dec 16, 2009, at 11:22 AM, Rutger Vos wrote: >>> >>>> Didn't we talk about this already, that we wanted to create a shared >>>> developer account or group so that we're all talking about the same >>>> environment with the same configuration? I'm not sure what the best >>>> way would be to set this up. >>>> >>>> On Wed, Dec 16, 2009 at 4:16 PM, Hilmar Lapp <hl...@ne...> wrote: >>>>> >>>>> Except that that person can't remain Rutger. -hilmar >>>>> On Dec 16, 2009, at 11:01 AM, youjun guo wrote: >>>>> >>>>> Now I kind of understand, once other developers finish a task and pass >>>>> the >>>>> testing on their own environment, just submit the code to sourceforg, >>>>> Rutger >>>>> will be the person who redeploy the new code. >>>>> >>>>> Thanks >>>>> >>>>> Youjun >>>>> >>>>> On Wed, Dec 16, 2009 at 10:47 AM, Vladimir Gapeyev >>>>> <vga...@ne...> >>>>> wrote: >>>>>> >>>>>> http://treebase-dev.nescent.org:6666/treebase-web is the only common >>>>>> TreeBase instance I am aware of. I presumed everyone had their own >>>>>> local >>>>>> tomcats for development purposes -- that's what I have been trying to >>>>>> set up >>>>>> for myself for the past two days... >>>>>> --Vladimir >>>>>> >>>>>> On Dec 16, 2009, at 10:40 AM, youjun guo wrote: >>>>>> >>>>>> Do you know which Tomcat server is assigned for all the TreeBASE >>>>>> developers? >>>>>> >>>>>> Youjun >>>>>> >>>>>> On Wed, Dec 16, 2009 at 10:20 AM, Vladimir Gapeyev >>>>>> <vga...@ne...> >>>>>> wrote: >>>>>>> >>>>>>> On Dec 16, 2009, at 10:02 AM, Vladimir Gapeyev wrote: >>>>>>> >>>>>>> On Dec 15, 2009, at 6:23 PM, youjun guo wrote: >>>>>>> >>>>>>> Vladimir, >>>>>>> >>>>>>> Do you know why I cannot access the treebase-web @ >>>>>>> treebase-dev.nescent.org:6666? I saw the home page flash and gone. >>>>>>> >>>>>>> Youjun >>>>>>> >>>>>>> The server itself is up: http://treebase-dev.nescent.org/. My first >>>>>>> guess that 6666 is down due to Rutger's ongoing experimentation with >>>>>>> Mesquite. (The same reasons I could not set up my deployment >>>>>>> yesterday?) >>>>>>> I'll try to find and check the logs. >>>>>>> >>>>>>> Il'' take the last one back: according to the notes Jon gave me, 6666 >>>>>>> starts from Rutger's homedir, to which only he has access. >>>>>>> --Vladimir >>>>>> >>>>> >>>>> >>>>> >>>>> ------------------------------------------------------------------------------ >>>>> This SF.Net email is sponsored by the Verizon Developer Community >>>>> Take advantage of Verizon's best-in-class app development support >>>>> A streamlined, 14 day to market process makes app distribution fast and >>>>> easy >>>>> Join now and get one step closer to millions of Verizon customers >>>>> http://p.sf.net/sfu/verizon-dev2dev >>>>> _______________________________________________ >>>>> Treebase-devel mailing list >>>>> Tre...@li... >>>>> https://lists.sourceforge.net/lists/listinfo/treebase-devel >>>>> >>>>> -- >>>>> =========================================================== >>>>> : Hilmar Lapp -:- Durham, NC -:- informatics.nescent.org : >>>>> =========================================================== >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> ------------------------------------------------------------------------------ >>>>> This SF.Net email is sponsored by the Verizon Developer Community >>>>> Take advantage of Verizon's best-in-class app development support >>>>> A streamlined, 14 day to market process makes app distribution fast and >>>>> easy >>>>> Join now and get one step closer to millions of Verizon customers >>>>> http://p.sf.net/sfu/verizon-dev2dev >>>>> _______________________________________________ >>>>> Treebase-devel mailing list >>>>> Tre...@li... >>>>> https://lists.sourceforge.net/lists/listinfo/treebase-devel >>>>> >>>>> >>>> >>>> >>>> >>>> -- >>>> Dr. Rutger A. Vos >>>> School of Biological Sciences >>>> Philip Lyle Building, Level 4 >>>> University of Reading >>>> Reading >>>> RG6 6BX >>>> United Kingdom >>>> Tel: +44 (0) 118 378 7535 >>>> http://www.nexml.org >>>> http://rutgervos.blogspot.com >>> >>> -- >>> =========================================================== >>> : Hilmar Lapp -:- Durham, NC -:- informatics.nescent.org : >>> =========================================================== >>> >>> >>> >>> >> >> >> >> -- >> Dr. Rutger A. Vos >> School of Biological Sciences >> Philip Lyle Building, Level 4 >> University of Reading >> Reading >> RG6 6BX >> United Kingdom >> Tel: +44 (0) 118 378 7535 >> http://www.nexml.org >> http://rutgervos.blogspot.com >> >> >> ------------------------------------------------------------------------------ >> This SF.Net email is sponsored by the Verizon Developer Community >> Take advantage of Verizon's best-in-class app development support >> A streamlined, 14 day to market process makes app distribution fast and >> easy >> Join now and get one step closer to millions of Verizon customers >> http://p.sf.net/sfu/verizon-dev2dev >> _______________________________________________ >> Treebase-devel mailing list >> Tre...@li... >> https://lists.sourceforge.net/lists/listinfo/treebase-devel > > ------------------------------------------------------- > Jon Auman > Systems Administrator > National Evolutionary Synthesis Center > Duke University > http:www.nescent.org > jon...@ne... > ------------------------------------------------------ > > -- Dr. Rutger A. Vos School of Biological Sciences Philip Lyle Building, Level 4 University of Reading Reading RG6 6BX United Kingdom Tel: +44 (0) 118 378 7535 http://www.nexml.org http://rutgervos.blogspot.com |