Menu
▾
▴
Re: [Treebase-devel] missing dependencies
|
From: Rutger V. <rut...@gm...> - 2009-12-15 09:44:04
|
> I am not quite understand of this: > > # Headless mesquite needs a window server (a virtual one is OK)" This only applies to environments that don't normally have a windowing server (such as X11), i.e. this can only happen on something like a linux server without a display attached. So on your desktop or laptop you can ignore this. I noticed this issue because on the NESCent server, mesquite failed to launch because even in headless mode, mesquite uses awt, and it assumes it needs to spawn java widgets. (This is not to say that the mesquite issues are all fixed now, but it emerged that this was one of the hurdles.) > On Mon, Dec 14, 2009 at 6:52 AM, Rutger Vos <rut...@gm...> wrote: >> >> Hi Youjun, >> >> since you have this fresh in your memory, could you check whether the >> wiki page >> https://sourceforge.net/apps/mediawiki/treebase/index.php?title=DeveloperEnvironment >> is complete and correct? And add/update as needed? >> >> Thanks! >> >> >> On Fri, Dec 11, 2009 at 7:13 PM, youjun guo <you...@ya...> wrote: >> > Vladimir, >> > >> > Unless you are going to do the developing work directly on the >> > treebase-dev >> > server , or you want to remotely deploy from your workstation to the >> > treebase tomcat server, your eclipse set up have nothing to do with the >> > shell envelopment. >> > >> > m2eclipse is a mvn inatall for eclipse. >> > >> > Youjun >> > >> > >> > On Fri, Dec 11, 2009 at 1:26 PM, Vladimir Gapeyev <vga...@ne...> >> > wrote: >> >> >> >> Youjun, >> >> As I understand, you suggest to skip the (mvn install; Eclipse >> >> workspace >> >> at trunk; create Java projects from existing files) part of >> >> instructions >> >> >> >> at https://sourceforge.net/apps/mediawiki/treebase/index.php?title=DeveloperEnvironment >> >> and instead start with an Eclipse workspace in a blank directory. >> >> I'll probably try that if nothing can make the above instructions work. >> >> However, it will be useful if we can make those wiki instructions >> >> work... >> >> --VG >> >> >> >> >> >> >> >> On Dec 11, 2009, at 11:35 AM, youjun guo wrote: >> >> >> >> Vladimir, >> >> >> >> 1st, make sure your eclipse have the maven plugin like m2eclipse and >> >> subversion plugin like subclipse installed. >> >> >> >> 2rd instead of creating a maven project, "import a maven project form >> >> remote reposotory" in other words - treebase sourceforge svn url. >> >> >> >> All the dependencies were defined in pom.xml, maven know how to find >> >> them >> >> online, even if they are missing from you local .m2 directory >> >> >> >> Youjun >> >> >> >> >> >> >> >> On Fri, Dec 11, 2009 at 11:06 AM, Vladimir Gapeyev >> >> <vga...@ne...> >> >> wrote: >> >>> >> >>> Yes, I followed the wiki instructions, including running mvn install - >> >>> Dmaven.test.skip=true in the proper shell environment. This appeared >> >>> to have created the repository in ~vgapeyev/.m2, which Eclipse does >> >>> see through the M2_REPO variable. >> >>> >> >>> Note that only a fraction of the dependencies is missing in Eclipse. >> >>> Is there a chance they are simply missing from the Maven config >> >>> files? That is, can someone check the status of the handful of the >> >>> dependencies I have mentioned? Again, I can supply the full list if >> >>> this turns out to be the right way to go. >> >>> >> >>> I also tried following Youjun's advice, to create Maven rather than >> >>> Java projects in Eclipse. The wizard asks questions (about group and >> >>> artifact IDs, which I, as a Maven novice, do not understand) and >> >>> finally stops with the error "A pom.xml file already exists in the >> >>> destination folder". >> >>> >> >>> --Vladimir >> >>> >> >>> >> >>> On Dec 11, 2009, at 8:37 AM, Rutger Vos wrote: >> >>> >> >>> > Yes, you have to do the maven build first (e.g. from the command >> >>> > line) >> >>> > and make sure in eclipse that the M2_REPO variable is configured >> >>> > correctly (i.e. points to your local repository in >> >>> > $HOME/.m2/repository) >> >>> > >> >>> > On Thu, Dec 10, 2009 at 11:39 PM, youjun guo <you...@ya...> >> >>> > wrote: >> >>> >> Make sure you import the project as maven project, it will find and >> >>> >> download >> >>> >> those dependencies for you. >> >>> >> >> >>> >> Youjun >> >>> >> >> >>> >> On Thu, Dec 10, 2009 at 6:18 PM, Vladimir Gapeyev >> >>> >> <vga...@ne... >> >>> >> > >> >>> >> wrote: >> >>> >>> >> >>> >>> Going through the installation instructions >> >>> >>> at >> >>> >>> >> >>> >>> https://sourceforge.net/apps/mediawiki/treebase/index.php?title=DeveloperEnvironment >> >>> >>> , >> >>> >>> I got to creation of Eclipse projects treebase-core and treebase- >> >>> >>> web. >> >>> >>> This gave me lots of missing buildpath entries: 11 in treebase- >> >>> >>> core and 39 >> >>> >>> in treebase-web. Please advise on how to proceed! >> >>> >>> Here are a few of the missing entries: >> >>> >>> M2_REPO/apple/apple-java-extensions/1.2/apple-java- >> >>> >>> extensions-1.2.jar >> >>> >>> M2_REPO/avalon-framework/avalon-framework/4.1.3/avalon- >> >>> >>> framework-4.1.3.jar >> >>> >>> M2_REPO/com/lowagie/itext/1.3/itext-1.3.jar >> >>> >>> >> >>> >>> M2_REPO/commons-beanutils/commons-beanutils/1.7.0/commons- >> >>> >>> beanutils-1.7.0.jar >> >>> >>> I can work on putting together the whole list in case it will be >> >>> >>> useful. >> >>> >>> --Vladimir >> >>> >>> >> >>> >>> >> >>> >>> >> >>> >>> ------------------------------------------------------------------------------ >> >>> >>> Return on Information: >> >>> >>> Google Enterprise Search pays you back >> >>> >>> Get the facts. >> >>> >>> http://p.sf.net/sfu/google-dev2dev >> >>> >>> >> >>> >>> _______________________________________________ >> >>> >>> Treebase-devel mailing list >> >>> >>> Tre...@li... >> >>> >>> https://lists.sourceforge.net/lists/listinfo/treebase-devel >> >>> >>> >> >>> >> >> >>> >> >> >>> >> >> >>> >> >> >>> >> ------------------------------------------------------------------------------ >> >>> >> Return on Information: >> >>> >> Google Enterprise Search pays you back >> >>> >> Get the facts. >> >>> >> http://p.sf.net/sfu/google-dev2dev >> >>> >> >> >>> >> _______________________________________________ >> >>> >> Treebase-devel mailing list >> >>> >> Tre...@li... >> >>> >> https://lists.sourceforge.net/lists/listinfo/treebase-devel >> >>> >> >> >>> >> >> >>> > >> >>> > >> >>> > >> >>> > -- >> >>> > Dr. Rutger A. Vos >> >>> > School of Biological Sciences >> >>> > Philip Lyle Building, Level 4 >> >>> > University of Reading >> >>> > Reading >> >>> > RG6 6BX >> >>> > United Kingdom >> >>> > Tel: +44 (0) 118 378 7535 >> >>> > http://www.nexml.org >> >>> > http://rutgervos.blogspot.com >> >>> >> >>> >> >>> >> >>> >> >>> ------------------------------------------------------------------------------ >> >>> Return on Information: >> >>> Google Enterprise Search pays you back >> >>> Get the facts. >> >>> http://p.sf.net/sfu/google-dev2dev >> >>> _______________________________________________ >> >>> Treebase-devel mailing list >> >>> Tre...@li... >> >>> https://lists.sourceforge.net/lists/listinfo/treebase-devel >> >> >> >> >> >> >> >> >> >> >> >> ------------------------------------------------------------------------------ >> >> Return on Information: >> >> Google Enterprise Search pays you back >> >> Get the facts. >> >> http://p.sf.net/sfu/google-dev2dev >> >> >> >> _______________________________________________ >> >> Treebase-devel mailing list >> >> Tre...@li... >> >> https://lists.sourceforge.net/lists/listinfo/treebase-devel >> >> >> > >> > >> > >> > ------------------------------------------------------------------------------ >> > Return on Information: >> > Google Enterprise Search pays you back >> > Get the facts. >> > http://p.sf.net/sfu/google-dev2dev >> > >> > _______________________________________________ >> > Treebase-devel mailing list >> > Tre...@li... >> > https://lists.sourceforge.net/lists/listinfo/treebase-devel >> > >> > >> >> >> >> -- >> Dr. Rutger A. Vos >> School of Biological Sciences >> Philip Lyle Building, Level 4 >> University of Reading >> Reading >> RG6 6BX >> United Kingdom >> Tel: +44 (0) 118 378 7535 >> http://www.nexml.org >> http://rutgervos.blogspot.com > > -- Dr. Rutger A. Vos School of Biological Sciences Philip Lyle Building, Level 4 University of Reading Reading RG6 6BX United Kingdom Tel: +44 (0) 118 378 7535 http://www.nexml.org http://rutgervos.blogspot.com |
