[Treebase-guts] SF.net SVN: treebase:[63] trunk/treebase-core/src/main/java/org/cipres/ treebase/domain/nexus/nexml/NexmlObjectConverter.java

[<rv...@us...>]

Revision: 63
          http://treebase.svn.sourceforge.net/treebase/?rev=63&view=rev
Author:   rvos
Date:     2009-06-19 02:14:12 +0000 (Fri, 19 Jun 2009)

Log Message:
-----------
Added attachAnnotation(String key,String value,URI,Annotatable) method and mPrismURI static field.

Modified Paths:
--------------
    trunk/treebase-core/src/main/java/org/cipres/treebase/domain/nexus/nexml/NexmlObjectConverter.java

Modified: trunk/treebase-core/src/main/java/org/cipres/treebase/domain/nexus/nexml/NexmlObjectConverter.java
===================================================================
--- trunk/treebase-core/src/main/java/org/cipres/treebase/domain/nexus/nexml/NexmlObjectConverter.java	2009-06-19 02:12:51 UTC (rev 62)
+++ trunk/treebase-core/src/main/java/org/cipres/treebase/domain/nexus/nexml/NexmlObjectConverter.java	2009-06-19 02:14:12 UTC (rev 63)
@@ -15,7 +15,9 @@
 
 public class NexmlObjectConverter extends AbstractNexusConverter {
 	protected static URI mDCURI;
+	protected static URI mPrismURI;
 	private static String mDCURIString = "http://purl.org/dc/elements/1.1/";
+	private static String mPrismURIString = "http://prismstandard.org/namespaces/1.2/basic/";
 	private static String mDCIdentifier = "dc:identifier";	
 	public static String TreeBASE2Prefix = "TreeBASE2";
 	private Document mDocument;
@@ -28,9 +30,10 @@
 	public NexmlObjectConverter(Study study, TaxonLabelHome taxonLabelHome, Document document) {
 		try {
 			mDCURI = new URI(mDCURIString);
+			mPrismURI = new URI(mPrismURIString);
 		} catch (URISyntaxException e) {
 			e.printStackTrace();
-		}	
+		}			
 		setTaxonLabelHome(taxonLabelHome);
 		setStudy(study);
 		setDocument(document);
@@ -57,12 +60,23 @@
 	 * @param tbPersistable
 	 */
 	protected void attachTreeBaseID(Annotatable annotatable,TBPersistable tbPersistable) {
-		annotatable.addAnnotationValue(mDCIdentifier, mDCURI, makeNamespacedID(tbPersistable));
+		attachAnnotation(mDCIdentifier,makeNamespacedID(tbPersistable),mDCURI,annotatable);
 	}
 	
 	/**
 	 * 
+	 * @param key
+	 * @param value
+	 * @param namespace
 	 * @param annotatable
+	 */
+	protected void attachAnnotation(String key,String value,URI namespace,Annotatable annotatable) {
+		annotatable.addAnnotationValue(key, namespace, value);
+	}
+	
+	/**
+	 * 
+	 * @param annotatable
 	 * @param persistableClass
 	 * @return
 	 */


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