[Treebase-guts] [ treebase-Bugs-2790248 ] Taxon Blocks duplicated in analysis download from

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Bugs item #2790248, was opened at 2009-05-11 19:11
Message generated for change (Comment added) made by rvos
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Category: data
Group: None
>Status: Closed
Priority: 3
Private: No
Submitted By: William Piel (sfrgpiel)
>Assigned to: Rutger Vos (rvos)
Summary: Taxon Blocks duplicated in analysis download from

Initial Comment:
When you click on http://8ball.sdsc.edu:6666/treebase-web/search/downloadAnAnalysisStep.html?analysisid=2022 to download an analysis, two identical TAXA blocks, each with the same title, are included in the nexus file. This is confusing to Mesquite, which doesn't know which goes with which. Please have the nexus written with only one TAXA block shared by both CHARACTER and TREE blocks. 

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>Comment By: Rutger Vos (rvos)
Date: 2009-05-14 21:45

Message:
Analysis steps are now serialized to nexus as follows: two taxa blocks are
created, one containing all taxon labels in all input data objects, and one
containing all taxon labels in all output data objects. The data objects
(trees, matrices) reference these respective taxa blocks, depending on
whether they're input or output data.

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You can respond by visiting: 
https://sourceforge.net/tracker/?func=detail&atid=1126676&aid=2790248&group_id=248804