Re: [Transposonpsi-users] a question about TransposonPSI

[Brian H. <bh...@br...>]

Hi Robert,

If you could share one of the failed targets, I could try running it myself
and try to debug it.

best,

-brian


2012/3/18 robert <ro...@ma...>

> **
> Dear Brian,
>
> There is a big genome sequences, so i split it to 32 datasets and write a
> shell to batch run TransposonPSI . 28 datasets  are successful, but another
> four is failure, There are no files with type
> of *TPSI.allHits.chains,*TPSI.allHits.chains.gff3,*TPSI.allHits.chains.bestPerLocus,*TPSI.allHits.chains.bestPerLocus.gff3,
> But there is a *TPSI.topHits.
>
> So Why? Would you like to tell me how to solve it?
>
> Thanks you very much!
>
> Best Regards!
>
> Yours Daojun Yuan
>
>  ------------------------------
>  Dr. Daojun Yuan
> National Key Laboratory of Crop Genetic Improvement,
> College of Plant Science and Technology
> Huazhong Agricultural University
> Wuhan, Hubei 430070, PR China
> Tel: + 86-27-87283955
> Fax: + 86-27-87280196
> Email:ro...@ma...
>       Rob...@gm...
>



-- 
-- 
Brian J. Haas
Manager, Genome Annotation and Analysis Research and Development
The Broad Institute
http://broad.mit.edu/~bhaas