Re: [Transdecoder-users] Make TranscriptDecoder

[Brian H. <bh...@br...>]

Hi Gisele,

If you're running this on a mac, then you might need to install a new
version of GCC.    I ended up building gcc 4.9 from source, and it works
quite well (but it definitely takes some time and effort).    If you have
access to a linux server, it would definitely be easier to just build it
and run it there.

best,

~brian


On Fri, Oct 31, 2014 at 2:35 PM, Gisele Antoniazzi Cardoso <
gi_...@ya...> wrote:

> Hi everyone!
>
> I need some help with transcriptdecoder. I am trying to do 'make simple',
> but I always get this error:
>
> clang: warning: argument unused during compilation: '-fopenmp'
> ParaFly.cpp:6:10: fatal error: 'omp.h' file not found
> #include <omp.h>
>          ^
> 1 error generated.
> make: *** [ParaFly.o] Error 1
>
> Any ideias how to solve this?
>
> Bets regards,
> Gisele
>
>
>
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-- 
--
Brian J. Haas
The Broad Institute
http://broad.mit.edu/~bhaas