[Transdecoder-users] Does TranscriptDecoder also predict polyA?
Extracting likely coding regions from transcript sequences
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From: Trakhtenberg, F. <Eph...@ch...> - 2014-07-19 19:00:16
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Hello, I am new to TranscriptDecoder. Does it consider whether a novel transcript with a predicted ORF is also predicted to be polyadenylated? I assumed if no polyA can be predicted, then even if ORF is predicted, such transcript may not produce a protein. My input is a group of novel transcripts predicted by Cufflinks analysis. Would appreciate feedback. thank you |