[Transdecoder-users] Transdecoder died with ret 6400 at line 498

[Brown, M. <mw...@ms...>]

Dear Brian,

My transdecoder install seems to work up until an error that I can not overcome during the best candidate selection. Do you have any suggestions?

Error, no gene obj retrieved based on identifier a2;23981|m.1 at /misc/home/mbrown/SOFTWARE/transdecoder_rel16JAN2014/util/../PerlLib/Gene_obj_indexer.pm line 61, <$fh> line 1.
Gene_obj_indexer::get_gene('Gene_obj_indexer=HASH(0x1df59a0)', 'a2;23981|m.1') called at /misc/home/mbrown/SOFTWARE/transdecoder_rel16JAN2014/util/gene_list_to_gff.pl line 29
Error, cmd: /misc/home/mbrown/SOFTWARE/transdecoder_rel16JAN2014/util/gene_list_to_gff.pl transdecoder.tmp.25824/longest_orfs.cds.scores.selected transdecoder.tmp.25824/longest_orfs.gff3.inx > transdecoder.tmp.25824/longest_orfs.cds.best_candidates.gff3 died with ret 6400 at /home/mbrown/SOFTWARE/transdecoder_rel16JAN2014/TransDecoder line 498.

Thank you in advance!
Matt

Matthew W. Brown, Ph.D.
Assistant Professor
Biological Sciences
Mississippi State University
008 Harned Hall
Mississippi State, MS 39762
662-325-2406
http://mwb250.biology.msstate.edu<http://mwb250.biology.msstate.edu/>