TranscriptDecoder Activity
Extracting likely coding regions from transcript sequences
Brought to you by:
bhaas
Activity for TranscriptDecoder
-
TranscriptDecoder released /README.txt
-
-
-
Carrie G modified a comment on discussion General Discussion
Hi Folks, When I untar the 2014-07 version, all of the folders under util are empty....
-
Hi Folks, When I untar the 2014-07 version, all of the folders under util are empty....
-
Xin Li posted a comment on discussion General Discussion
Is there way to select only one ORF per transcript? Also Is there way to eliminate...
-
David posted a comment on discussion General Discussion
Hi, I'd like to provide my own training file to TransDecoder using the --train option....
-
-
Brian Haas committed [r134]
update
-
release
-
add
-
update
-
dont prefix peptide and cds sequence accessions...
-
included make simple for just transdecoder and ...
-
Vishweshwaran posted a comment on discussion General Discussion
Hi, Has anyone used Transdecoder from trinotate (Trinity denovo assembly). Here is...
-
Alexie committed [r128]
prints out mRNA as well
-
set local PATH before global PATH, include LD_L...
-
add
-
cut release 16JAN2014
-
reverted ffindex to be dynamically linked.
-
added static version of ffindex no need to buil...
-
cut release 13JAN2014
-
updated documentation for ffindex commit
-
symlink
-
updated cd-hit
-
ffindex is now static
-
don't delete pfam when cleaning
-
minor make file changes
-
Jan Provazník posted a comment on discussion General Discussion
Dear TD team, I have just a small suggestion based on a problem I encountered. Cd-hit...
-
help doc on retain_long_orfs
-
new pfam download instructions
-
clarified the email subscription section
1
