Activity for The Software Ontology
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Allyson Lister modified a wiki page
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Obsoleted duplicate class SWO_1000102 'Modified...
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changed 'software license' to 'license' to bett...
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Matthew Brush committed [r395]
added nine data format specification classes fo...
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added three new programming language classes to...
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Trivial change for test commit.
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added classes required for COBRA and libSBML
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added classes required for VCell
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added classes relevant to COPASI and iBioSim
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JMalone committed [r389]
release 1.5 SWO merged and inferred
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resolved the use of the EDAM Data hierarchy wit...
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removed unnecessary axiom placing the SWO infor...
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Obsoleted XML (SWO, http://www.ebi.ac.uk/swo/da...
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resolved the use of the EDAM Format hierarchy w...
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resolved the use of the EDAM Operation hierarch...
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removed OntoDM information processing class and...
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updated version of EDAM added
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removed erroneous label for 'sbml' called 'sbml...
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updated BFO IDs for process and material entity.
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adding formats according to the tracker item ht...
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An update to this: MathML was added FieldML was added SBML, CellML and SMILES were...
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some additional data and data formats created, ...
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added segway software and associated classes.
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added segway software and associated classes.
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added segway software and associated classes.
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EDAM and RO: output of / input of
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what happens when an unversioned software references a versioned one?
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moved has declared status, has clause and has l...
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made has format specification a child of is enc...
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moved the is specified data input of / output o...
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removed algorithm execution hierarchy as comple...
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algorithm and algorithm execution
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documentation updates
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We all seem happy to remove the algorithm execution hierarchy, as it is currently...
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Plain text file format seems redundant, as does ASCII format. It is enough to use...
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Location of definition for classes in SWO
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We decided to use the definition annotation, and all have been updated.
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Additional 'objective specification' subclasses
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Data mining and data processing tasks
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No need to import any further OntoDM classes until it is clear that we need them....
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Added definitions to these classes.
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documentation updates
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added comments to has specified data input/output
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updated natural language definitions
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updated edam OWL file to verison 1.6
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updated natural language definitions
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updated natural language definitions
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tabix file format
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large number of changes made to definitions. Ad...
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all object properties now have definitions, bar...
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deprecated the object property 'has legal status'
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refactored OBI class has_role to be http://purl...
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added http://www.ebi.ac.uk/swo/organization/SWO...
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refactored has participant to have the RO URI r...
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Added comments to the modified BFO/RO terms fol...
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refactored RO terms 'followed by' and 'preceded...
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Added definitions: followed by; directly follow...
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set the boolean owl#deprecated to true for 3 un...
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more updates to external classes including proc...
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refactored EFO's example_of_usage to be IAO's e...
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rationalized definition annotations for informa...
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fix to range of is encoded in object property
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added swo definition tags to SWO definitions, a...
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release 1.2
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info processing equivalent to ontodm inf proc c...
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blast axiom fix
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refactoring some objectives as processes
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Added IAO's definition and example of usage for...
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