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● Notice
Our paper about TFBS-Scanner is in review for publication.
Until all of publication processes are finished, all of files for TFBS-Scanner are locked with passwords.

● DISCLAIMER!
We notice the DISCLAIMER of 'TRANFAC database ver 7.0 -public'.
The TRANSFAC database is free for users from non-profit organizations only.

You can get the detail information about visit 'TRANFAC database ver 7.0 -public' through below
http://www.gene-regulation.com/cgi-bin/pub/databases/transfac/search.cgi
(You need a registration.)

● Reference
Matys V, et al. 'TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes.' Nucleic Acids Res. 2006 Jan 1;34(Database issue):D108-10.

● Different TFBS prediction performance between TRANSFAC ver 9.4 professional and ver 7.0 public
You can get the predicted TFBS results (based only on ver 7.0) below figure by using TFBS-scanner based on the given 'test_input.xlxs' in 'Downloads' menu.
※we do not serve the plotting program for predicted TFBSs or other ChIP-Seq results.

For the detail view for above figure, click the below URL
http://sourceforge.net/projects/tfbsscanner/files/For%20manual/Performance%20difference_example.pdf/download