Tempo2 / Changelog: Recent posts

Update script updated again

• update
  link

Update script now changes to a new place

• update
  link

no message

• README.md (bitbucket.org)
  link

Merged hotfix into master

• .gitignore (bitbucket.org)
• Makefile.am (bitbucket.org)
• TKfit.C (bitbucket.org)
• TKfit.h (bitbucket.org)
• TKlongdouble.float128.h (bitbucket.org)
• TKlongdouble.ld.h (bitbucket.org)
• TKmatrix.h (bitbucket.org)
• TKspectrum.C (bitbucket.org)
• TKspectrum.h (bitbucket.org)
• autoconf.boot/package.m4 (bitbucket.org)
• cholesky.C (bitbucket.org)
• doconfigure
• t2fit.C (bitbucket.org)
• t2spectrum.C (bitbucket.org)
• tests/Makefile.am (bitbucket.org)
• tests/gtest-1.7.0/include/gtest/gtest.h (bitbucket.org)
  link

Merged in docs (pull request #4) Docs

• Doxyfile
• Makefile.am (bitbucket.org)
• T2runtime/example_data/example1.par (bitbucket.org)
• T2runtime/example_data/example1.tim (bitbucket.org)
• T2toolkit.C (bitbucket.org)
• T2toolkit.h (bitbucket.org)
• autoconf.boot/qd.m4 (bitbucket.org)
• configure.ac (bitbucket.org)
• documentation/1_USER_GUIDE.md (bitbucket.org)
• documentation/2_developers.md (bitbucket.org)
• documentation/3_DEVELOPER_GUIDE.md (bitbucket.org)
• documentation/4_directories.md (bitbucket.org)
• documentation/5_plugins.md (bitbucket.org)
• documentation/DoxygenLayout.xml (bitbucket.org)
• documentation/tempo2_documentation.pdf (bitbucket.org)
• tempo2.C (bitbucket.org)
• tempo2.h (bitbucket.org)
  link

Fix for issue #6. Only disable signed/unsigned on GCC v 4.8 and above as there is a bug in lower versions which prevents compiling.

• tests/gtest-1.7.0/include/gtest/gtest.h (bitbucket.org)
  link

Merge branch 'master' into hotfix

• README
• README.md (bitbucket.org)
  link

Added more docs. Added example files

• Doxyfile
• T2runtime/example_data/example1.par (bitbucket.org)
• T2runtime/example_data/example1.tim (bitbucket.org)
• documentation/1_USER_GUIDE.md (bitbucket.org)
• documentation/5_plugins.md (bitbucket.org)
• documentation/tempo2_documentation.pdf (bitbucket.org)
  link

Only include headers in documentation

• Doxyfile
• documentation/1_USER_GUIDE.md (bitbucket.org)
• documentation/2_developers.md (bitbucket.org)
• documentation/3_DEVELOPER_GUIDE.md (bitbucket.org)
• documentation/4_directories.md (bitbucket.org)
• documentation/DEVELOPER_GUIDE.md (bitbucket.org)
• documentation/USER_GUIDE.md (bitbucket.org)
• documentation/developers.md (bitbucket.org)
• documentation/directories.md (bitbucket.org)
• documentation/tempo2_documentation.pdf (bitbucket.org)
• tempo2.C (bitbucket.org)
• tempo2.h (bitbucket.org)
  link

Merge branch 'master' into docs

• README
• README.md (bitbucket.org)
  link

README.md edited online with Bitbucket

• README.md (bitbucket.org)
  link

Updated readme

• README.md (bitbucket.org)
  link

Renamed README so it will show nice markup

• README
• README.md (bitbucket.org)
  link

Added more documentation

• Doxyfile
• Makefile.am (bitbucket.org)
• T2toolkit.C (bitbucket.org)
• T2toolkit.h (bitbucket.org)
• documentation/DEVELOPER_GUIDE.md (bitbucket.org)
• documentation/DoxygenLayout.xml (bitbucket.org)
• documentation/doxygen/DoxygenLayout.xml (bitbucket.org)
• documentation/tempo2_documentation.pdf (bitbucket.org)
  link

Started adding doxygen docs

• Makefile.am (bitbucket.org)
• autoconf.boot/qd.m4 (bitbucket.org)
• configure.ac (bitbucket.org)
• documentation/DEVELOPER_GUIDE.md (bitbucket.org)
• documentation/USER_GUIDE.md (bitbucket.org)
• documentation/developers.md (bitbucket.org)
• documentation/directories.md (bitbucket.org)
• documentation/doxygen/DoxygenLayout.xml (bitbucket.org)
• tempo2.C (bitbucket.org)
• tempo2.h (bitbucket.org)
  link

Added more careful dealing with tests and precision

• TKlongdouble.C (bitbucket.org)
• TKlongdouble.ld.h (bitbucket.org)
• bootstrap
• mpack_lite/makemake.sh (bitbucket.org)
• mpack_lite/mpack-routines
• tempo2.C (bitbucket.org)
• tests/Makefile.am (bitbucket.org)
• tests/gtest-1.7.0/src/gtest.cc (bitbucket.org)
• tests/gtest_extensions.h (bitbucket.org)
• tests/testTempo2.C (bitbucket.org)
  link

Removed mpack SVD, gone back to traditional.

• TKlongdouble.float128.h (bitbucket.org)
• TKmatrix.cpp (bitbucket.org)
• TKspectrum.C (bitbucket.org)
• TKsvd.cpp (bitbucket.org)
• TKsvd.detail.cpp (bitbucket.org)
• t2fit.C (bitbucket.org)
• tests/Makefile.am (bitbucket.org)
• tests/custom-test-driver
• tests/testEndToEnd.C (bitbucket.org)
• tests/testTKmatrix.C (bitbucket.org)
• tests/testTempo2.C (bitbucket.org)
  link

Merged various changes since branch

• .gitignore (bitbucket.org)
• Makefile.am (bitbucket.org)
• TKfit.C (bitbucket.org)
• TKfit.h (bitbucket.org)
• TKlongdouble.float128.h (bitbucket.org)
• TKlongdouble.ld.h (bitbucket.org)
• TKspectrum.C (bitbucket.org)
• TKspectrum.h (bitbucket.org)
• autoconf.boot/acx_pthread.m4 (bitbucket.org)
• autoconf.boot/package.m4 (bitbucket.org)
• autoconf.boot/qd.m4 (bitbucket.org)
• cholesky.C (bitbucket.org)
• configure.ac (bitbucket.org)
• doFit.C (bitbucket.org)
• doconfigure
• formResiduals.C (bitbucket.org)
• initialise.C (bitbucket.org)
• plugin/GWanisobkgrd_plug.C (bitbucket.org)
• plugin/GWbkgrd_plug.C (bitbucket.org)
• plugin/GWdipolebkgrd_plug.C (bitbucket.org)
• plugin/GWgeneralanisobkgrd_plug.C (bitbucket.org)
• plugin/GWgeneralbkgrd_plug.C (bitbucket.org)
• plugin/plk_plug.C (bitbucket.org)
• readTimfile.C (bitbucket.org)
• t2fit.C (bitbucket.org)
• t2spectrum.C (bitbucket.org)
• tempo2.C (bitbucket.org)
• tempo2.h (bitbucket.org)
• temponest/Makefile.am (bitbucket.org)
• temponest/MultiNestParams.cpp (bitbucket.org)
• temponest/TempoNest.h (bitbucket.org)
• temponest/TempoNestFindMax.cpp (bitbucket.org)
• temponest/TempoNestFindMaxGPU.cpp (bitbucket.org)
• temponest/TempoNestGPUFuncs.cu (bitbucket.org)
• temponest/TempoNestGPULikeFuncs.cpp (bitbucket.org)
• temponest/TempoNestGPULinearLikeFuncs.cpp (bitbucket.org)
• temponest/TempoNestLikeFuncs.cpp (bitbucket.org)
• temponest/TempoNestLinearLikeFuncs.cpp (bitbucket.org)
• temponest/TempoNestParams.cpp (bitbucket.org)
• temponest/TempoNestPlugin.cpp (bitbucket.org)
• temponest/TempoNestSim.cpp (bitbucket.org)
• temponest/TempoNestTextOutput.cpp (bitbucket.org)
• temponest/TempoNestUpdateLinear.cpp (bitbucket.org)
• temponest/TempoNestUtilities.cpp (bitbucket.org)
• temponest/TempoNestparams.h (bitbucket.org)
• temponest/TempoSim.paramnames (bitbucket.org)
• temponest/configfile.cpp (bitbucket.org)
• temponest/configfile.h (bitbucket.org)
• temponest/constraints.h (bitbucket.org)
• temponest/dgemm.cpp (bitbucket.org)
• temponest/dgemm.h (bitbucket.org)
• temponest/dgemv.cpp (bitbucket.org)
• temponest/dgemv.h (bitbucket.org)
• temponest/dgesvd.cpp (bitbucket.org)
• temponest/dgesvd.h (bitbucket.org)
• temponest/dpotrf.cpp (bitbucket.org)
• temponest/dpotrf.h (bitbucket.org)
• temponest/dpotri.cpp (bitbucket.org)
• temponest/dpotri.h (bitbucket.org)
• temponest/dpotrs.cpp (bitbucket.org)
• temponest/dpotrs.h (bitbucket.org)
• temponest/manual/Example1.pdf (bitbucket.org)
• temponest/manual/Example2.pdf (bitbucket.org)
• temponest/manual/Example3.pdf (bitbucket.org)
• temponest/manual/Sim1.pdf (bitbucket.org)
• temponest/manual/Sim2.pdf (bitbucket.org)
• temponest/manual/TempoNestManual.aux (bitbucket.org)
• temponest/manual/TempoNestManual.bbl (bitbucket.org)
• temponest/manual/TempoNestManual.blg (bitbucket.org)
• temponest/manual/TempoNestManual.log (bitbucket.org)
• temponest/manual/TempoNestManual.pdf (bitbucket.org)
• temponest/manual/TempoNestManual.tex (bitbucket.org)
• temponest/manual/TempoNestManualNotes.bib (bitbucket.org)
• temponest/manual/revtex4-1.cls (bitbucket.org)
• temponest/multinest.h (bitbucket.org)
• temponest/multinest/kmeans_clstr.f90 (bitbucket.org)
• temponest/multinest/multinest.am (bitbucket.org)
• temponest/multinest/nested.F90 (bitbucket.org)
• temponest/multinest/posterior.F90 (bitbucket.org)
• temponest/multinest/priors.f90 (bitbucket.org)
• temponest/multinest/utils.f90 (bitbucket.org)
• temponest/multinest/utils1.f90 (bitbucket.org)
• temponest/multinest/xmeans_clstr.f90 (bitbucket.org)
• temponest/temponest.am (bitbucket.org)
• temponest/triplot.py (bitbucket.org)
• tests/Makefile.am (bitbucket.org)
• tests/testEndToEnd.C (bitbucket.org)
• tests/testTempo2.C (bitbucket.org)
• update
  link

Stop t2toolkit depending on libtempo2

• Makefile.am (bitbucket.org)
• TKspectrum.C (bitbucket.org)
• TKspectrum.h (bitbucket.org)
• autoconf.boot/package.m4 (bitbucket.org)
• cholesky.C (bitbucket.org)
• doconfigure
• t2spectrum.C (bitbucket.org)
  link

Fix for issue #5

• .gitignore (bitbucket.org)
• Makefile.am (bitbucket.org)
• TKfit.C (bitbucket.org)
• TKfit.h (bitbucket.org)
• TKlongdouble.float128.h (bitbucket.org)
• TKlongdouble.ld.h (bitbucket.org)
• TKmatrix.h (bitbucket.org)
• t2fit.C (bitbucket.org)
• tests/Makefile.am (bitbucket.org)
  link

HOTFIX: fix qd.m4 to not add -lqd when there is no qd

• autoconf.boot/qd.m4 (bitbucket.org)
  link

Merged in temponest_deintegration (pull request #3) Temponest_deintegration

• .gitignore (bitbucket.org)
• Makefile.am (bitbucket.org)
• autoconf.boot/qd.m4 (bitbucket.org)
• configure.ac (bitbucket.org)
• plugin/GWanisobkgrd_plug.C (bitbucket.org)
• plugin/GWbkgrd_plug.C (bitbucket.org)
• plugin/GWdipolebkgrd_plug.C (bitbucket.org)
• plugin/GWgeneralanisobkgrd_plug.C (bitbucket.org)
• plugin/GWgeneralbkgrd_plug.C (bitbucket.org)
• plugin/plk_plug.C (bitbucket.org)
• plugin/plugin_lists/vanilla.plugins (bitbucket.org)
• temponest/Makefile.am (bitbucket.org)
• temponest/MultiNestParams.cpp (bitbucket.org)
• temponest/TempoNest.h (bitbucket.org)
• temponest/TempoNestFindMax.cpp (bitbucket.org)
• temponest/TempoNestFindMaxGPU.cpp (bitbucket.org)
• temponest/TempoNestGPUFuncs.cu (bitbucket.org)
• temponest/TempoNestGPULikeFuncs.cpp (bitbucket.org)
• temponest/TempoNestGPULinearLikeFuncs.cpp (bitbucket.org)
• temponest/TempoNestLikeFuncs.cpp (bitbucket.org)
• temponest/TempoNestLinearLikeFuncs.cpp (bitbucket.org)
• temponest/TempoNestParams.cpp (bitbucket.org)
• temponest/TempoNestPlugin.cpp (bitbucket.org)
• temponest/TempoNestSim.cpp (bitbucket.org)
• temponest/TempoNestTextOutput.cpp (bitbucket.org)
• temponest/TempoNestUpdateLinear.cpp (bitbucket.org)
• temponest/TempoNestUtilities.cpp (bitbucket.org)
• temponest/TempoNestparams.h (bitbucket.org)
• temponest/TempoSim.paramnames (bitbucket.org)
• temponest/configfile.cpp (bitbucket.org)
• temponest/configfile.h (bitbucket.org)
• temponest/constraints.h (bitbucket.org)
• temponest/dgemm.cpp (bitbucket.org)
• temponest/dgemm.h (bitbucket.org)
• temponest/dgemv.cpp (bitbucket.org)
• temponest/dgemv.h (bitbucket.org)
• temponest/dgesvd.cpp (bitbucket.org)
• temponest/dgesvd.h (bitbucket.org)
• temponest/dpotrf.cpp (bitbucket.org)
• temponest/dpotrf.h (bitbucket.org)
• temponest/dpotri.cpp (bitbucket.org)
• temponest/dpotri.h (bitbucket.org)
• temponest/dpotrs.cpp (bitbucket.org)
• temponest/dpotrs.h (bitbucket.org)
• temponest/manual/Example1.pdf (bitbucket.org)
• temponest/manual/Example2.pdf (bitbucket.org)
• temponest/manual/Example3.pdf (bitbucket.org)
• temponest/manual/Sim1.pdf (bitbucket.org)
• temponest/manual/Sim2.pdf (bitbucket.org)
• temponest/manual/TempoNestManual.aux (bitbucket.org)
• temponest/manual/TempoNestManual.bbl (bitbucket.org)
• temponest/manual/TempoNestManual.blg (bitbucket.org)
• temponest/manual/TempoNestManual.log (bitbucket.org)
• temponest/manual/TempoNestManual.pdf (bitbucket.org)
• temponest/manual/TempoNestManual.tex (bitbucket.org)
• temponest/manual/TempoNestManualNotes.bib (bitbucket.org)
• temponest/manual/revtex4-1.cls (bitbucket.org)
• temponest/multinest.h (bitbucket.org)
• temponest/multinest/kmeans_clstr.f90 (bitbucket.org)
• temponest/multinest/multinest.am (bitbucket.org)
• temponest/multinest/nested.F90 (bitbucket.org)
• temponest/multinest/posterior.F90 (bitbucket.org)
• temponest/multinest/priors.f90 (bitbucket.org)
• temponest/multinest/utils.f90 (bitbucket.org)
• temponest/multinest/utils1.f90 (bitbucket.org)
• temponest/multinest/xmeans_clstr.f90 (bitbucket.org)
• temponest/temponest.am (bitbucket.org)
• temponest/triplot.py (bitbucket.org)
• tests/testTempo2.C (bitbucket.org)
• update
  link

Merged in ltlBranch (pull request #2) started to merge..

• autoconf.boot/qd.m4 (bitbucket.org)
• configure.ac (bitbucket.org)
• doFit.C (bitbucket.org)
• formResiduals.C (bitbucket.org)
• initialise.C (bitbucket.org)
• readTimfile.C (bitbucket.org)
• tempo2.C (bitbucket.org)
• tempo2.h (bitbucket.org)
  link

Merge branch 'ltlBranch' into temponest_deintegration Small changes to make merge correct # Conflicts: # configure.ac

• Makefile.am (bitbucket.org)
• autoconf.boot/qd.m4 (bitbucket.org)
• configure.ac (bitbucket.org)
• doFit.C (bitbucket.org)
• formResiduals.C (bitbucket.org)
• initialise.C (bitbucket.org)
• readTimfile.C (bitbucket.org)
• tempo2.C (bitbucket.org)
• tempo2.h (bitbucket.org)
  link

started to merge..

• autoconf.boot/qd.m4 (bitbucket.org)
• configure.ac (bitbucket.org)
• doFit.C (bitbucket.org)
• formResiduals.C (bitbucket.org)
• initialise.C (bitbucket.org)
• readTimfile.C (bitbucket.org)
• tempo2.C (bitbucket.org)
• tempo2.h (bitbucket.org)
  link