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Re: [MACTCL] [EXTERNAL] Re: Problem compiling TkTable on Mac OS 14.6.1 Sonoma
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From: Friedman, R. A. <ra...@cu...> - 2024-09-12 22:11:08
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Dear Paul,
Thank you for the flag. It helped matters, but there still seem to be some problems. I do not know if you can help with this considering that Tktable is no longer supported, but here is the info in case you can help.
```
sudo CFLAGS='-fpermissive -Wno-error=incompatible-function-pointer-types' configure
.
.
.
config.status: WARNING: 'Makefile.in' seems to ignore the --datarootdir setting
.
.
.
./generic/tkTable.c:164:52: warning: incompatible function pointer types initializing 'Tk_OptionPrintProc *' (aka 'const char *(*)(void *, struct Tk_Window_ *, char *, int, void (**)(char *))') with an expression of type 'char *(ClientData, Tk_Window, char *, int, Tcl_FreeProc **)' (aka 'char *(void *, struct Tk_Window_ *, char *, int, void (**)(char *))') [-Wincompatible-function-pointer-types]
static Tk_CustomOption drawOpt = { Cmd_OptionSet, Cmd_OptionGet,
.
.
.
./generic/tkTableCellSort.c:73:1: warning: a function definition without a prototype is deprecated in all versions of C and is not supported in C2x [-Wdeprecated-non-prototype]
TableSortCompareProc(first, second)
^
.
.
.
./generic/tkTableCmds.c:186:14: warning: cast to smaller integer type 'int' from 'void *' [-Wvoid-pointer-to-int-cast]
posn = ((int) Tcl_GetHashKey(hashTablePtr, entryPtr)) + offset;
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.
.
.
./generic/tkTableUtil.c:73:1: warning: a function definition without a prototype is deprecated in all versions of C and is not supported in C2x [-Wdeprecated-non-prototype]
TableOptionBdSet(clientData, interp, tkwin, value, widgRec, offset)
```
No errors. Just warnings
```
raf4$ make test
.
.
.
==== table-1.92 configuration options, -relief FAILED
==== Contents of test case:
list [catch {.t configure $name [lindex $test 3]} msg] $msg
---- Result was:
1 {bad relief "1.5": must be flat, groove, raised, ridge, solid, or sunken}
---- Result should have been (exact matching):
.
.
. Tests ended at Thu Sep 12 17:35:57 EDT 2024
all.tcl: Total 225 Passed 223 Skipped 0 Failed 2
$make demo
TCL_LIBRARY=`echo /private/tmp/tcl-tk-20240229-4610-gcj7fw/tcl8.6.14/library` TK_LIBRARY=`echo /private/tmp/tcl-tk--tk-20240229-4610-xewyz9/tk8.6.14/library` DYLD_LIBRARY_PATH=".:/usr/local/lib:/usr/local/lib:" PATH=".:/usr/local/lib:/usr/local/lib:/opt/local/bin:/opt/local/sbin:/usr/local/bin:/usr/local/sbin:/bin:/usr/bin:/usr/local/bin:/usr/local/gfortran/bin:/Applications/samtools-1.17/bin:/Applications:/Users/raf4/opt/anaconda3/bin:/Users/raf4/opt/anaconda3/condabin:/usr/sbin:/sbin:/opt/X11/bin:/Library/Apple/usr/bin:/Applications/bowtie/bowtie2-2.5.1-macos-x86_64:/Applications/bismark/Bismark-0.24.1:/opt/local/bin/bedtools:/usr/local/bin/R:/opt/local/bin:/opt/local/libexec/meme-5.5.5:." TCLLIBPATH="." /usr/local/bin/wish8.6 `echo ./demos/debug.tcl` | cat
Tktable v2.11 loaded
Table is .t with array t
```
Seems to have worked fine and produced a table, but I also got a popup that said “wish 8.6 quit unexpectedly”
```
#make install
```
No error messages.
I would apprciate any suggestions.
Thanks and best wishes,
Rich
From: Obermeier-Tcl3D <obe...@tc...>
Date: Wednesday, September 11, 2024 at 6:44 PM
To: tc...@li... <tc...@li...>
Subject: Re: [MACTCL] [EXTERNAL] Re: Problem compiling TkTable on Mac OS 14.6.1 Sonoma
You don't often get email from obe...@tc.... Learn why this is important<https://aka.ms/LearnAboutSenderIdentification>
Sorry Richard.
Forgot to mention, that you have to lower the strictness of gcc.
Since gcc 14 several issues, which have been just warnings before, are now errors.
You can work around the strictness by specifying the following options when running configure:
CFLAGS='-fpermissive -Wno-error=incompatible-function-pointer-types' configure ...
Regards,
Paul
Am 11.09.2024 um 20:32 schrieb Friedman, Richard A.:
Dear Paul,
I downloaded Tktable 2.11 and still got the same error message when I used make
```
(base) icrc8cc-n004:Tktable-2.11 raf4$ make
sed -e '/^\#/d' -e '/^$/d' -e 's/\\/\\\\/g' -e 's/\"/\\"/g' -e 's/^/"/' -e 's/$/\\n"/' < `echo library/tkTable.tcl` > 'tkTable.tcl.h' || { rm -f tkTable.tcl.h; exit 1; }
gcc -DPACKAGE_NAME=\"Tktable\" -DPACKAGE_TARNAME=\"tktable\" -DPACKAGE_VERSION=\"2.11\" -DPACKAGE_STRING=\"Tktable\ 2.11\" -DPACKAGE_BUGREPORT=\"\" -DBUILD_Tktable=/\*\*/ -DMAC_OSX_TK=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DNO_VALUES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_SYS_PARAM_H=1 -DUSE_THREAD_ALLOC=1 -D_REENTRANT=1 -D_THREAD_SAFE=1 -DTCL_THREADS=1 -DMODULE_SCOPE=extern\ __attribute__\(\(__visibility__\(\"hidden\"\)\)\) -DTCL_WIDE_INT_IS_LONG=1 -DUSE_TCL_STUBS=1 -DUSE_TK_STUBS=1 -DTBL_COMMAND=\"table\" -DTBL_RUNTIME=\"tkTable.tcl\" -DTBL_RUNTIME_DIR=\"/usr/local/Cellar/tcl-tk/8.6.14/lib/Tktable2.11\" -I. -I"./generic" -I"/usr/local/Cellar/tcl-tk/8.6.14/include/tcl-tk" -I"/usr/local/Cellar/tcl-tk/8.6.14/include/tcl-tk" -pipe -Os -Wall -fno-common -c `echo ./generic/tkTable.c` -o tkTable.o
./generic/tkTable.c:164:52: error: incompatible function pointer types initializing 'Tk_OptionPrintProc *' (aka 'const char *(*)(void *, struct Tk_Window_ *, char *, int, void (**)(char *))') with an expression of type 'char *(ClientData, Tk_Window, char *, int, Tcl_FreeProc **)' (aka 'char *(void *, struct Tk_Window_ *, char *, int, void (**)(char *))') [-Wincompatible-function-pointer-types]
static Tk_CustomOption drawOpt = { Cmd_OptionSet, Cmd_OptionGet,
```
I have not used table list. I am not a Tcl programmer. I am installing Tktable because an R program, affylmGUI requires it to run on a Mac. The program has worked very with previous versions of R and Mac OS, bit is running into trouble here.
I would appreciate any further suggestions.
Thanks and best wishes,
Rich
From: Obermeier-Tcl3D <obe...@tc...><mailto:obe...@tc...>
Date: Tuesday, September 10, 2024 at 7:22 PM
To: tc...@li...<mailto:tc...@li...> <tc...@li...><mailto:tc...@li...>
Subject: [EXTERNAL] Re: [MACTCL] Problem compiling TkTable on Mac OS 14.6.1 Sonoma
You don't often get email from obe...@tc...<mailto:obe...@tc...>. Learn why this is important<https://aka.ms/LearnAboutSenderIdentification>
Dear Richard,
please try my Tktable 2.11 version, which can be found at https://www.tcl3d.org/bawt/download.html#packages
It is a slightly modified (Mac related) version of Tktable as supplied at https://chiselapp.com/user/pooryorick/repository/tktable/
Please note, that Tktable is not supported or developed anymore.
Do you know package tablelist (https://wiki.tcl-lang.org/page/tablelist)?
I switched all previous usages of Tktable to tablelist.
Regards,
Paul
Am 10.09.2024 um 21:48 schrieb Friedman, Richard A.:
Dear List,
I need TkTable working to run the R program, affylmGUI.
I am trying to compile it under Mac OS 14.16.1.
I have Tcl8.6.14 installed in /usr/local/bin/ .
I installed Tcl8.6.14 with homebrew.
Here is my attempt at compiling Tktable
```
$ pwd
/usr/local/lib/Tktable2.10
$ sudo make
gcc -DPACKAGE_NAME=\"Tktable\" -DPACKAGE_TARNAME=\"tktable\" -DPACKAGE_VERSION=\"2.10\" -DPACKAGE_STRING=\"Tktable\ 2.10\" -DPACKAGE_BUGREPORT=\"\" -DMAC_OSX_TK=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DNO_VALUES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_SYS_PARAM_H=1 -DUSE_THREAD_ALLOC=1 -D_REENTRANT=1 -D_THREAD_SAFE=1 -DTCL_THREADS=1 -DMODULE_SCOPE=extern\ __attribute__\(\(__visibility__\(\"hidden\"\)\)\) -DTCL_WIDE_INT_IS_LONG=1 -DUSE_TCL_STUBS=1 -DUSE_TK_STUBS=1 -DTBL_COMMAND=\"table\" -DTBL_RUNTIME=\"tkTable.tcl\" -DTBL_RUNTIME_DIR=\"/usr/local/Cellar/tcl-tk/8.6.14/lib/Tktable2.10\" -I. -I"./generic" -I"/usr/local/Cellar/tcl-tk/8.6.14/include/tcl-tk" -I"/usr/local/Cellar/tcl-tk/8.6.14/include/tcl-tk" -pipe -Os -Wall -Wno-implicit-int -fno-common -c `echo ./generic/tkTable.c` -o tkTable.o
./generic/tkTable.c:164:52: error: incompatible function pointer types initializing 'Tk_OptionPrintProc *' (aka 'const char *(*)(void *, struct Tk_Window_ *, char *, int, void (**)(char *))') with an expression of type 'char *(ClientData, Tk_Window, char *, int, Tcl_FreeProc **)' (aka 'char *(void *, struct Tk_Window_ *, char *, int, void (**)(char *))') [-Wincompatible-function-pointer-types]
static Tk_CustomOption drawOpt = { Cmd_OptionSet, Cmd_OptionGet,
.
.
,
$ sudo make install
Password:
gcc -DPACKAGE_NAME=\"Tktable\" -DPACKAGE_TARNAME=\"tktable\" -DPACKAGE_VERSION=\"2.10\" -DPACKAGE_STRING=\"Tktable\ 2.10\" -DPACKAGE_BUGREPORT=\"\" -DMAC_OSX_TK=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DNO_VALUES_H=1 -DHAVE_LIMITS_H=1 -DHAVE_SYS_PARAM_H=1 -DUSE_THREAD_ALLOC=1 -D_REENTRANT=1 -D_THREAD_SAFE=1 -DTCL_THREADS=1 -DMODULE_SCOPE=extern\ __attribute__\(\(__visibility__\(\"hidden\"\)\)\) -DTCL_WIDE_INT_IS_LONG=1 -DUSE_TCL_STUBS=1 -DUSE_TK_STUBS=1 -DTBL_COMMAND=\"table\" -DTBL_RUNTIME=\"tkTable.tcl\" -DTBL_RUNTIME_DIR=\"/usr/local/Cellar/tcl-tk/8.6.14/lib/Tktable2.10\" -I. -I"./generic" -I"/usr/local/Cellar/tcl-tk/8.6.14/include/tcl-tk" -I"/usr/local/Cellar/tcl-tk/8.6.14/include/tcl-tk" -pipe -Os -Wall -Wno-implicit-int -fno-common -c `echo ./generic/tkTable.c` -o tkTable.o
./generic/tkTable.c:164:52: error: incompatible function pointer types initializing 'Tk_OptionPrintProc *' (aka 'const char *(*)(void *, struct Tk_Window_ *, char *, int, void (**)(char *))') with an expression of type 'char *(ClientData, Tk_Window, char *, int, Tcl_FreeProc **)' (aka 'char *(void *, struct Tk_Window_ *, char *, int, void (**)(char *))') [-Wincompatible-function-pointer-types]
static Tk_CustomOption drawOpt = { Cmd_OptionSet, Cmd_OptionGet,
.
.
.
```
Note the error message.
I have been able to install TkTable in previous versions of Mac OS.
Please advise.
Thank you,
Richard Friedman
Bioinformatics Core
Herbert Irving Comprehensive Cancer Center
Columbia University Irving Medical Center
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