#16 Increasing seq overlap led to decreasing success

[Anonymous]

When sequece overlap increases from 300 bp to 600 bp,
success rates alway decrease regardless of the identify
of the gene being used.

So a perfect dataset taken from Cytb was generated. All
sequences are of full length (1140bp) and no gaps were
present anywhere in the sequences. Best match and best
closted match (3.33% threshold value) results remained
the same for 300, 600, and 1000 sequence overlap.
Please go to the following directory for the dataset
and results.

Please refer to
P-> TaxonDNA -> Bugs -> Best&Bestclose Match ->
<Cytb_for_testing_increasing_overlap_2.txt> (Dataset)
and <Cytb_for_testing_increasing_overlap.xls) (results)

[Gaurav]

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user_id=712450

So we know that the overlap isn't *too* screwy (atleast)!
Yay!

I'm leaving this open in case other reasons come to light to
explain the strange result.