https://sourceforge.net/p/tapdancebio/wiki/Database%2520Configuration/Recent changes to Database ConfigurationenFri, 11 Nov 2011 21:55:57 -0000https://sourceforge.net/p/tapdancebio/wiki/Database%2520Configuration/<pre>--- v1 +++ v2 @@ -1,20 +1,20 @@ All of the connection settings for the database TAPDANCE is to use are copied from tapdance_base_config.pl to the project environment. This includes establishing the connection in Perl that TAPDANCE will use. See the embedded code sample for a configuration example: -# The username to authenticate to the database with +\# The username to authenticate to the database with $db_username = "my_db_user"; -# The user's password +\# The user's password $db_password = "my_db_password"; -# The host where MySQL is running +\# The host where MySQL is running $db_host = "127.0.0.1"; -# The port MySQL is listening on +\# The port MySQL is listening on $db_port = '3306'; -# The database to use, the user must have table creation privileges +\# The database to use, the user must have table creation privileges $db_name = "my_database_name"; -# Currently only MySQL is available, but in the future other options may also exist +\# Currently only MySQL is available, but in the future other options may also exist $db_type = 'mysql'; -#Putting it all together +\#Putting it all together $data_source = "dbi:$db_type:dbname=$db_name:$db_host;mysql_local_infile=1:$db_port"; -# Establishing the connection +\# Establishing the connection $dbh = DBI->connect($data_source, $db_username, $db_password, { RaiseError => 1, AutoCommit => 0 }); </pre>Jesse ErdmannFri, 11 Nov 2011 21:55:57 -0000https://sourceforge.netf24ee68595b5beb8e090467a4a61543a29eb097dhttps://sourceforge.net/p/tapdancebio/wiki/Database%2520Configuration/All of the connection settings for the database TAPDANCE is to use are copied from tapdance_base_config.pl to the project environment. This includes establishing the connection in Perl that TAPDANCE will use. See the embedded code sample for a configuration example: # The username to authenticate to the database with $db_username = "my_db_user"; # The user's password $db_password = "my_db_password"; # The host where MySQL is running $db_host = "127.0.0.1"; # The port MySQL is listening on $db_port = '3306'; # The database to use, the user must have table creation privileges $db_name = "my_database_name"; # Currently only MySQL is available, but in the future other options may also exist $db_type = 'mysql'; #Putting it all together $data_source = "dbi:$db_type:dbname=$db_name:$db_host;mysql_local_infile=1:$db_port"; # Establishing the connection $dbh = DBI->connect($data_source, $db_username, $db_password, { RaiseError => 1, AutoCommit => 0 }); Jesse ErdmannFri, 11 Nov 2011 21:54:55 -0000https://sourceforge.net7ae5ec1519ba984c78efc3228f99bbc352c3f55e