Recent changes to Cross Project Consolodation Example

WikiPage Cross Project Consolodation Example modified by Jesse Erdmann

Jesse Erdmann — Fri, 02 Dec 2011 16:18:27 -0000

--- v3 
+++ v4 
@@ -6,4 +6,10 @@
 
 From Galaxy:
 
+First you have to generate the current project list:
+
+![List Projects](http://tapdancebio.sourceforge.net/screenshots/List_projects.png)
+
+Then run the actual merge
+
 ![Merge Projects](http://tapdancebio.sourceforge.net/screenshots/TAPDANCE_merge_project_example.png)

WikiPage Cross Project Consolodation Example modified by Jesse Erdmann

Jesse Erdmann — Fri, 02 Dec 2011 16:16:57 -0000

--- v2 
+++ v3 
@@ -6,3 +6,4 @@
 
 From Galaxy:
 
+![Merge Projects](http://tapdancebio.sourceforge.net/screenshots/TAPDANCE_merge_project_example.png)

WikiPage Cross Project Consolodation Example modified by Jesse Erdmann

Jesse Erdmann — Tue, 22 Nov 2011 20:21:11 -0000

--- v1 
+++ v2 
@@ -2,7 +2,7 @@
 
 From the command line:
 
-     -merge my_proj_1 -merge my_proj_2 -merge my_proj_3 -projectName my_merged_projects
+     perl ./tapdance_runner.pl -merge my_proj_1 -merge my_proj_2 -merge my_proj_3 -projectName my_merged_projects
 
 From Galaxy:

WikiPage Cross Project Consolodation Example modified by Jesse Erdmann

Jesse Erdmann — Tue, 15 Nov 2011 23:15:47 -0000

This process merges the data from multiple experiments into a single set that can have CIS calculated. See the paper for details on appropriately selecting data sets to merge and how things like batch effect are managed. In this case, new sequences are not added. From the command line: -merge my_proj_1 -merge my_proj_2 -merge my_proj_3 -projectName my_merged_projects From Galaxy: