Tahoe Code SVN tahoe

Added third cohesive surface formulation (code = 2) for anisotropic cohesive
surfaces without a rotating local coordinate frame.

Added third cohesive surface formulation (code = 2) for anisotropic cohesive
surfaces without a rotating local coordinate frame. Also, updated registering
output for new support for joining element output.

Added option to enable/disable co-rotational coordinate frame with
CSEAnisoT.

To support joining element output variables, the ID's for all element
blocks in an output set are written to "[job name].io.ID", by rank 0,
immediately after the output set it registered.

Added clear to end of line after prompting for number of partitions to join.
Trailing newline was flushing input at next prompt.

Added trap for bad jacobian determinants

Descending into sub-directories is no longer done by treating the sub-directories
as targets. This caused problems because some directories were missed and mult-
iple directories were being processed simulatenously. Directories are not hit one
at a time using "for" loops. Also, a common set of suffix rules in now in
macros/suffix
and "make" instructions for the sub-directories are now read from
macros/subdir.targets
NOTE: the make system in the new macros module is not compatible with the
old make system. To rebuild, you must update all modules.

Added dialog box for command line arguments for MacOS using CodeWarrior

Added missing MPI_CFLAGS and MPI_LFLAGS

Added fix to clear newline after prompting for size in RunDecomp_serial. Otherwise, next read from cin is empty.