[svtoolkit-help] genome mask files

[Mark C. <m.c...@ga...>]

Hi,
I saw the 1KG SV Nature paper & I would like to run the genome STRiP algo on some cancer data that i've generated.
Installation went fairly smoothly, but i'm looking here: https://www.broadinstitute.org/gsa/wiki/index.php/Genome_STRiP_Genome_Mask_Files
and the link to precomputed mask files is dead & I can't see a 'ComputeGenomeMask' cmdline util in the svtoolkit dir.

Can you please let me know how i can find these?

cheers,
Mark


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Mark Cowley, PhD

Garvan Cancer Program & Peter Wills Bioinformatics Centre
Garvan Institute of Medical Research, Sydney, Australia
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