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pt_load warnings issue

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Roger Greene
2019-06-10
2020-11-22

  • Roger Greene

    Roger Greene - 2019-06-10

    Dear Valery and Statifier,

    Thank you for creating this tool. I'm not sure if I'm using it correctly or it is the VDSO issue but am trying to statically bundle OpenFOAM with it. Although a static binary is created the following warnings are given:

    /usr/lib/statifier/64/non_pt_load: warning: can't find segment with v_addr=0x0
    /usr/lib/statifier/64/non_pt_load: warning: can't find segment with v_addr=0x242000

    And the resulting binary will not run and returns the error:

    -bash: ./checkMesh.statifier: cannot execute binary file: Exec format error

    Is there any recommended way to debug or fix this issue.

     
    alternate

  • Valery Reznic

    Valery Reznic - 2019-06-12

    Could you please send me output of the
    readelf -aW <your_original_exe></your_original_exe>

     

  • Gunar Gessner

    Gunar Gessner - 2020-11-22

    Hi, I've hit the same problem while trying to "statify" sox. Hope you don't mind but here's the output of readelf -aW $(which sox). Thanks in advance!

    Error

    /usr/lib/statifier/64/non_pt_load: warning: can't find segment with v_addr=0x0
/usr/lib/statifier/64/non_pt_load: warning: can't find segment with v_addr=0x4000
/usr/lib/statifier/64/non_pt_load: warning: can't find segment with v_addr=0xd000
/usr/lib/statifier/64/non_pt_load: warning: can't find segment with v_addr=0x11000

    readelf -aW

    ELF Header:
  Magic:   7f 45 4c 46 02 01 01 00 00 00 00 00 00 00 00 00 
  Class:                             ELF64
  Data:                              2's complement, little endian
  Version:                           1 (current)
  OS/ABI:                            UNIX - System V
  ABI Version:                       0
  Type:                              DYN (Shared object file)
  Machine:                           Advanced Micro Devices X86-64
  Version:                           0x1
  Entry point address:               0x6ca0
  Start of program headers:          64 (bytes into file)
  Start of section headers:          74240 (bytes into file)
  Flags:                             0x0
  Size of this header:               64 (bytes)
  Size of program headers:           56 (bytes)
  Number of program headers:         11
  Size of section headers:           64 (bytes)
  Number of section headers:         27
  Section header string table index: 26

Section Headers:
  [Nr] Name              Type            Address          Off    Size   ES Flg Lk Inf Al
  [ 0]                   NULL            0000000000000000 000000 000000 00      0   0  0
  [ 1] .interp           PROGBITS        00000000000002a8 0002a8 00001c 00   A  0   0  1
  [ 2] .note.gnu.build-id NOTE            00000000000002c4 0002c4 000024 00   A  0   0  4
  [ 3] .note.ABI-tag     NOTE            00000000000002e8 0002e8 000020 00   A  0   0  4
  [ 4] .gnu.hash         GNU_HASH        0000000000000308 000308 000034 00   A  5   0  8
  [ 5] .dynsym           DYNSYM          0000000000000340 000340 000b88 18   A  6   1  8
  [ 6] .dynstr           STRTAB          0000000000000ec8 000ec8 000690 00   A  0   0  1
  [ 7] .gnu.version      VERSYM          0000000000001558 001558 0000f6 02   A  5   0  2
  [ 8] .gnu.version_r    VERNEED         0000000000001650 001650 0000d0 00   A  6   3  8
  [ 9] .rela.dyn         RELA            0000000000001720 001720 001b30 18   A  5   0  8
  [10] .rela.plt         RELA            0000000000003250 003250 000018 18  AI  5  22  8
  [11] .init             PROGBITS        0000000000004000 004000 00001b 00  AX  0   0  4
  [12] .plt              PROGBITS        0000000000004020 004020 000020 10  AX  0   0 16
  [13] .text             PROGBITS        0000000000004040 004040 008272 00  AX  0   0 16
  [14] .fini             PROGBITS        000000000000c2b4 00c2b4 00000d 00  AX  0   0  4
  [15] .rodata           PROGBITS        000000000000d000 00d000 002cb0 00   A  0   0 16
  [16] .eh_frame_hdr     PROGBITS        000000000000fcb0 00fcb0 000194 00   A  0   0  4
  [17] .eh_frame         PROGBITS        000000000000fe48 00fe48 000ab8 00   A  0   0  8
  [18] .init_array       INIT_ARRAY      0000000000011f50 010f50 000008 08  WA  0   0  8
  [19] .fini_array       FINI_ARRAY      0000000000011f58 010f58 000008 08  WA  0   0  8
  [20] .data.rel.ro      PROGBITS        0000000000011f60 010f60 000aa0 00  WA  0   0 32
  [21] .dynamic          DYNAMIC         0000000000012a00 011a00 000220 10  WA  6   0  8
  [22] .got              PROGBITS        0000000000012c20 011c20 0003d0 08  WA  0   0  8
  [23] .data             PROGBITS        0000000000013000 012000 0000f0 00  WA  0   0 32
  [24] .bss              NOBITS          0000000000013100 0120f0 000608 00  WA  0   0 32
  [25] .comment          PROGBITS        0000000000000000 0120f0 000012 01  MS  0   0  1
  [26] .shstrtab         STRTAB          0000000000000000 012102 0000f7 00      0   0  1
Key to Flags:
  W (write), A (alloc), X (execute), M (merge), S (strings), I (info),
  L (link order), O (extra OS processing required), G (group), T (TLS),
  C (compressed), x (unknown), o (OS specific), E (exclude),
  l (large), p (processor specific)

There are no section groups in this file.

Program Headers:
  Type           Offset   VirtAddr           PhysAddr           FileSiz  MemSiz   Flg Align
  PHDR           0x000040 0x0000000000000040 0x0000000000000040 0x000268 0x000268 R   0x8
  INTERP         0x0002a8 0x00000000000002a8 0x00000000000002a8 0x00001c 0x00001c R   0x1
      [Requesting program interpreter: /lib64/ld-linux-x86-64.so.2]
  LOAD           0x000000 0x0000000000000000 0x0000000000000000 0x003268 0x003268 R   0x1000
  LOAD           0x004000 0x0000000000004000 0x0000000000004000 0x0082c1 0x0082c1 R E 0x1000
  LOAD           0x00d000 0x000000000000d000 0x000000000000d000 0x003900 0x003900 R   0x1000
  LOAD           0x010f50 0x0000000000011f50 0x0000000000011f50 0x0011a0 0x0017b8 RW  0x1000
  DYNAMIC        0x011a00 0x0000000000012a00 0x0000000000012a00 0x000220 0x000220 RW  0x8
  NOTE           0x0002c4 0x00000000000002c4 0x00000000000002c4 0x000044 0x000044 R   0x4
  GNU_EH_FRAME   0x00fcb0 0x000000000000fcb0 0x000000000000fcb0 0x000194 0x000194 R   0x4
  GNU_STACK      0x000000 0x0000000000000000 0x0000000000000000 0x000000 0x000000 RW  0x10
  GNU_RELRO      0x010f50 0x0000000000011f50 0x0000000000011f50 0x0010b0 0x0010b0 R   0x1

 Section to Segment mapping:
  Segment Sections...
   00     
   01     .interp 
   02     .interp .note.gnu.build-id .note.ABI-tag .gnu.hash .dynsym .dynstr .gnu.version .gnu.version_r .rela.dyn .rela.plt 
   03     .init .plt .text .fini 
   04     .rodata .eh_frame_hdr .eh_frame 
   05     .init_array .fini_array .data.rel.ro .dynamic .got .data .bss 
   06     .dynamic 
   07     .note.gnu.build-id .note.ABI-tag 
   08     .eh_frame_hdr 
   09     
   10     .init_array .fini_array .data.rel.ro .dynamic .got 

Dynamic section at offset 0x11a00 contains 30 entries:
  Tag        Type                         Name/Value
 0x0000000000000001 (NEEDED)             Shared library: [libsox.so.3]
 0x0000000000000001 (NEEDED)             Shared library: [libm.so.6]
 0x0000000000000001 (NEEDED)             Shared library: [libpthread.so.0]
 0x0000000000000001 (NEEDED)             Shared library: [libc.so.6]
 0x000000000000000c (INIT)               0x4000
 0x000000000000000d (FINI)               0xc2b4
 0x0000000000000019 (INIT_ARRAY)         0x11f50
 0x000000000000001b (INIT_ARRAYSZ)       8 (bytes)
 0x000000000000001a (FINI_ARRAY)         0x11f58
 0x000000000000001c (FINI_ARRAYSZ)       8 (bytes)
 0x000000006ffffef5 (GNU_HASH)           0x308
 0x0000000000000005 (STRTAB)             0xec8
 0x0000000000000006 (SYMTAB)             0x340
 0x000000000000000a (STRSZ)              1680 (bytes)
 0x000000000000000b (SYMENT)             24 (bytes)
 0x0000000000000015 (DEBUG)              0x0
 0x0000000000000003 (PLTGOT)             0x12c20
 0x0000000000000002 (PLTRELSZ)           24 (bytes)
 0x0000000000000014 (PLTREL)             RELA
 0x0000000000000017 (JMPREL)             0x3250
 0x0000000000000007 (RELA)               0x1720
 0x0000000000000008 (RELASZ)             6960 (bytes)
 0x0000000000000009 (RELAENT)            24 (bytes)
 0x0000000000000018 (BIND_NOW)           
 0x000000006ffffffb (FLAGS_1)            Flags: NOW PIE
 0x000000006ffffffe (VERNEED)            0x1650
 0x000000006fffffff (VERNEEDNUM)         3
 0x000000006ffffff0 (VERSYM)             0x1558
 0x000000006ffffff9 (RELACOUNT)          169
 0x0000000000000000 (NULL)               0x0

Relocation section '.rela.dyn' at offset 0x1720 contains 290 entries:
    Offset             Info             Type               Symbol's Value  Symbol's Name + Addend
0000000000011f50  0000000000000008 R_X86_64_RELATIVE                         6d90
0000000000011f58  0000000000000008 R_X86_64_RELATIVE                         6d40
0000000000011f60  0000000000000008 R_X86_64_RELATIVE                         d3d4
0000000000011f68  0000000000000008 R_X86_64_RELATIVE                         d3d4
0000000000011f70  0000000000000008 R_X86_64_RELATIVE                         d6e1
0000000000011f78  0000000000000008 R_X86_64_RELATIVE                         d6e1
0000000000011f80  0000000000000008 R_X86_64_RELATIVE                         d6c4
0000000000011f88  0000000000000008 R_X86_64_RELATIVE                         d6c4
0000000000011f90  0000000000000008 R_X86_64_RELATIVE                         d6c3
0000000000011f98  0000000000000008 R_X86_64_RELATIVE                         d6e0
0000000000011fa0  0000000000000008 R_X86_64_RELATIVE                         d6c7
0000000000011fa8  0000000000000008 R_X86_64_RELATIVE                         d6c7
0000000000011fb0  0000000000000008 R_X86_64_RELATIVE                         d6c6
0000000000011fb8  0000000000000008 R_X86_64_RELATIVE                         d6df
0000000000011fc0  0000000000000008 R_X86_64_RELATIVE                         d6cb
0000000000011fc8  0000000000000008 R_X86_64_RELATIVE                         d6cb
0000000000011fd0  0000000000000008 R_X86_64_RELATIVE                         d6ca
0000000000011fd8  0000000000000008 R_X86_64_RELATIVE                         d6de
0000000000011fe0  0000000000000008 R_X86_64_RELATIVE                         d6d0
0000000000011fe8  0000000000000008 R_X86_64_RELATIVE                         d6d0
0000000000011ff0  0000000000000008 R_X86_64_RELATIVE                         d6cf
0000000000011ff8  0000000000000008 R_X86_64_RELATIVE                         d6dd
0000000000012000  0000000000000008 R_X86_64_RELATIVE                         d6eb
0000000000012008  0000000000000008 R_X86_64_RELATIVE                         d6eb
0000000000012010  0000000000000008 R_X86_64_RELATIVE                         d6d5
0000000000012018  0000000000000008 R_X86_64_RELATIVE                         d6dc
0000000000012020  0000000000000008 R_X86_64_RELATIVE                         d6e3
0000000000012028  0000000000000008 R_X86_64_RELATIVE                         d6e3
0000000000012030  0000000000000008 R_X86_64_RELATIVE                         d6ea
0000000000012038  0000000000000008 R_X86_64_RELATIVE                         d6f1
0000000000012040  0000000000000008 R_X86_64_RELATIVE                         dcd0
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The decoding of unwind sections for machine type Advanced Micro Devices X86-64 is not currently supported.

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  05c:   0 (*local*)       0 (*local*)       3 (GLIBC_2.2.5)   0 (*local*)    
  060:   9 (GLIBC_2.27)    6 (GLIBC_2.7)     0 (*local*)       3 (GLIBC_2.2.5)
  064:   3 (GLIBC_2.2.5)   0 (*local*)       3 (GLIBC_2.2.5)   0 (*local*)    
  068:   0 (*local*)       0 (*local*)       0 (*local*)       5 (GLIBC_2.3.4)
  06c:   0 (*local*)       0 (*local*)       3 (GLIBC_2.2.5)   0 (*local*)    
  070:   0 (*local*)       a (GLIBC_2.29)    2 (GLIBC_2.2.5)   4 (GLIBC_2.2.5)
  074:   3 (GLIBC_2.2.5)   b (GLIBC_2.15)    0 (*local*)       3 (GLIBC_2.2.5)
  078:   3 (GLIBC_2.2.5)   3 (GLIBC_2.2.5)   3 (GLIBC_2.2.5)

Version needs section '.gnu.version_r' contains 3 entries:
 Addr: 0x0000000000001650  Offset: 0x001650  Link: 6 (.dynstr)
  000000: Version: 1  File: libpthread.so.0  Cnt: 1
  0x0010:   Name: GLIBC_2.2.5  Flags: none  Version: 4
  0x0020: Version: 1  File: libc.so.6  Cnt: 7
  0x0030:   Name: GLIBC_2.15  Flags: none  Version: 11
  0x0040:   Name: GLIBC_2.27  Flags: none  Version: 9
  0x0050:   Name: GLIBC_2.4  Flags: none  Version: 8
  0x0060:   Name: GLIBC_2.3  Flags: none  Version: 7
  0x0070:   Name: GLIBC_2.7  Flags: none  Version: 6
  0x0080:   Name: GLIBC_2.3.4  Flags: none  Version: 5
  0x0090:   Name: GLIBC_2.2.5  Flags: none  Version: 3
  0x00a0: Version: 1  File: libm.so.6  Cnt: 2
  0x00b0:   Name: GLIBC_2.29  Flags: none  Version: 10
  0x00c0:   Name: GLIBC_2.2.5  Flags: none  Version: 2

Displaying notes found in: .note.gnu.build-id
  Owner                Data size    Description
  GNU                  0x00000014   NT_GNU_BUILD_ID (unique build ID bitstring)     Build ID: c5b88fe1e295fe1da6e26b64a8a90a03939b3295

Displaying notes found in: .note.ABI-tag
  Owner                Data size    Description
  GNU                  0x00000010   NT_GNU_ABI_TAG (ABI version tag)        OS: Linux, ABI: 3.2.0
     

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