In our lab we are using pregap4 for quality and vector clipping. But now I have a problem with the sequencing vector clipping in pregap4. With pregap4 v1.2 vector clipping works fine and all *.exp files are written to the *.passed file as it should be. But with pregap4 v1.5 *.exp files are written to the *.failed file although sequence vector clipping worked as well as before and the same configuration file was used in both cases. Has anyone an idea what causes this behavior?
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