i'm a new user on linux and i use Fedora Core 6.
I would like know, what is the procedure for installing package staden.
I tried a lot of test, i failled always :(
My kernel is i686
if somebody cam explain me step by step.
I'm french so my english...:§
Thanks to all
And special thanks for all guy who want help me ;)
1) In first download the io_lib 1.10.1 and package Staden-1-7-0 x86
unzip and extract file from archive to tour home directoy
2) Secondly move this 2 directory in /usr/local with comand mv
3) go to direcoty io_lib 1.10.1:
cd /usr/local/io_lib 1.10.1
4) go to /etc and edit profile file
kwrite profile &
add in file this:
5)type in console trev
6)type in console gap4
if u have |stash error ........|
2 solves :
u are log on root then use user account
or if u are|stash: error while loading shared libraries: libssl.so.0.9.7: cannot open shared object file: No such file or directory|
duplicate libssl.so.0.9.7a and rename it libssl.so.0.9.7
7) Try in console: gap4
8) Now if u are
|couldn't read file "/usr/local/staden-linux-1-7-0/lib/iwidgets/iwidgets.tcl": no such file or directory |
Go to /usr/local/share/ and copy directory iwidgets4.0.1 past this in /usr/local/staden-1-7-0/lib/
now u are:
go to /usr/local/staden-1-7-0/tables/
and edit iwidgetsrc file:
If u are now this problem:
inux-bin]$ invalid command name "load_alignment_matrix"
"load_alignment_matrix [keylget gap_defs ALIGNMENT.MATRIX_FILE]"
(file ".../staden-linux-1-7-0/linux-bin/../lib/gap/gap.tcl" line 683).
write in console :
and run gap 4 at the commandline
1) if u have this:
load libcopy_reads.so =>
load libitcl3.3.so =>
load libitk3.3.so =>
load libiwidgets.so => couldn't load file "libiwidgets.so": libiwidgets.so: cannot open shared object file: No such file or directory
load libcap2.so =>
load libcap3.so =>
load libfak2.so =>
load libphrap.so =>
load libhaplo.so =>
load libgap.so =>
then it's ok
2)if u are a error at line load libcopy_reads.so then u need install the package compat-gcc-34
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