pregap4 Config File or Naming Scheme

2006-02-03
2013-04-18
  • Tom Isenbarger

    Tom Isenbarger - 2006-02-03

    I have sequenced 96 PCR products (16S rRNA genes) from both ends using T3 and T7 sites on the cloning vector.  Can anyone point me to a Config File or Naming Scheme file for doing a directed assembly with these paired end reads?

    ***Also, I have repeated the sequencing, so I also need a Config File or Naming Scheme File for a directed assembly of 2 sets of paired end reads.  That is, I have 2 reads from the same T3 sequencing primer and 2 reads from the same T7 sequencing primer and I want to use all 4 reads in the directed assembly.

    Thanks,
    Tom Isenbarger

     
    • Tom Isenbarger

      Tom Isenbarger - 2006-02-28

      no answers here yet?  where else might i look for help?

       

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