How to extract information from contig

2006-06-08
2013-04-18
  • Nobody/Anonymous

    Hello,

    I would like to extract the trace file name, how many and the starting overlapping position in all contigs of my Gap4 database v4.10 (more than 2000). Is it possible ?
    Could somebody help me to solve this problem ?
    Thanks in advance for your assistance.

    CZ

     
    • mbs_

      mbs_ - 2006-06-08

      You should find all the information in the files you will get doing "Extract readings". There the LN tag will provide you with the tracefilename. The positions you seem to look for may be in the QL and QR tags.

      mbs

       
    • James Bonfield

      James Bonfield - 2006-07-04

      The Show Relationships command is pretty much what you want too.

      James

       

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