Is it possible to change the read name convention in used by pregap4? We have an established a read name in our lab similar to the St.Louis format. Thanks.
The pregap4 file menu allows you to load a naming scheme.
Look for $STADENROOT/lib/pregap4/naming_schemes/*.p4t for the existing naming convention definitions.
To add your own you need to know a little bit about regular expressions. There's some documentaion on building naming schemes at:
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