I learn from the author of CAP3 that it is no longer supported. So, it would probably be a good idea to remove mention of it from
the staden documentation and site.
I inquired about availability, as advised in http://staden.sourceforge.net/manual/gap4_unix_88.html, and learned form Xiaoqiu Huang
"The staden package requires a special version of CAP3, instead of a stand-alone version of CAP3. The stand-alone version of CAP3is
up-to-date, whereas the version of CAP3 for use in GAP4 is 7 or 8 years old. I have not been able to keep the GAP4 version of CAP3
P.S. - I posted this also to bionet.software.staden which seems pretty dead, so, here it is here too. Cheers!
Yep, it has been that way for quite a while. I think I posted about this a year or two back. On OS X you can't use Fak or Cap. About the only decent assembler is phrap, and you have to get that yourself.
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